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Name : nifS (CLH_1120) Accession : YP_001920514.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Unknown Product : cysteine desulfurase NifS Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 1186851 - 1188032 bp Length : 1182 bp Strand : + Note : identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR03402 DNA sequence : ATGAGAAACGTATATATGGATTATGCGGCTACAACTTATGTAAAACCTGAAGTGTTAGAAGAAATGTTACCATATTTTAC GAAGAACTTTGGTAATCCATCTTCTTTTTATGAAATATCAAGAACAACTAAGATGGCTATAGATGAAGCAAGAGCAAAAG TTGCAAAAGCATTGAATTGTGAAACGAGTGAAGTATATTTCACGGGTGGTGGATCAGAAGCTGATAACTGGGCAATAAAA GGTATTGCTTCTGCTCATAAAAATAAAGGTAATCATATAATAACAACAAAGGTAGAACATCATGCAGTTCTTCACACATG CCAATATTTAGAAAAACTTGGTTTTGAAGTAACTTACTTAGATGTTGATGAAGAAGGTTTTATTAATATAGAAGATTTAA AAAATGCTATAACAGATAAAACTATATTAGTTTCAATAATGTTTGCAAATAATGAAATAGGAACAATTCAACCAATTAAA GAAATTGGGGAGATATGTAAAGAAAGAAATGTTTATTTCCATACTGATGCTGTTCAAGCAATTGGGAATGCTCCGATTGA TGTAAAAGAAATGAATATAGATATGTTATCATTAGCAGGCCATAAGATTTATGGACCTAAAGGTATTGGTGTTTTATATA TTAAAAAAGGAATAAGAATTGAAAACTTGATTCATGGTGGTGGTCAAGAAAGAACAAGAAGAGCTGGAACAGAAAATATA GCTTCTATAGTAGGTCTTGGCAAAGCTATTGAATTGGCTACAGCAAATTTAGAAGAACATATTAAGACGATGAGTGAATT AAGAGATAGATTAATAGATGGACTACTTGAAATACCGTATTCACATCTAAATGGTCCAAGAGGAGATAAGAGATTACCTG GTAATGTAAATGTAAGATTTAGATTTATAGAAGGTGAATCAATTCTTTTATCTTTAGATTTTGAAGGAATATGTGCATCC AGTGGAAGTGCTTGTACATCAGGATCGCTAGATCCATCACATGTATTATTAGCAATTGGGTTACCACATGAAGAAGCACA TGGATCATTAAGATTAACACTAGGGGATGGATCTAACATAGAAGATGTAGATTATGTTATAGAAACATTACCACCTATTA TTCAAAGATTAAGAAACATGTCACCATTATGGGAAGACTTTTTAAAGAAGGGAGAAAATTAA Protein sequence : MRNVYMDYAATTYVKPEVLEEMLPYFTKNFGNPSSFYEISRTTKMAIDEARAKVAKALNCETSEVYFTGGGSEADNWAIK GIASAHKNKGNHIITTKVEHHAVLHTCQYLEKLGFEVTYLDVDEEGFINIEDLKNAITDKTILVSIMFANNEIGTIQPIK EIGEICKERNVYFHTDAVQAIGNAPIDVKEMNIDMLSLAGHKIYGPKGIGVLYIKKGIRIENLIHGGGQERTRRAGTENI ASIVGLGKAIELATANLEEHIKTMSELRDRLIDGLLEIPYSHLNGPRGDKRLPGNVNVRFRFIEGESILLSLDFEGICAS SGSACTSGSLDPSHVLLAIGLPHEEAHGSLRLTLGDGSNIEDVDYVIETLPPIIQRLRNMSPLWEDFLKKGEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 1e-62 | 43 |
