Gene Information

Name : CLH_1373 (CLH_1373)
Accession : YP_001920765.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1471238 - 1471534 bp
Length : 297 bp
Strand : +
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAGATATTATGGTGAAGAAGCTTTAGGTCTTGTAGAAACATTAGGAATGGTTCCAGCAATTGAAGCGGCAGACAAAAT
GTTAAAGGCTGCAAATGTGGAGTTGATTTCATATGAAAATGTAGGATCAACCCTTGTTACAATAATGATTAAGGGTGATG
TGGCTGCAGTTACATCAGCTGTAGAAGCAGGTGCTGAAGCCGCTGCTGCTATAGGTAAATTAACAGCAAAAAATGTTATG
CCACGTCCTATTAGAGAAGTTGGAGATATTGTTTCTGTACATGATGTTGATTCATAA

Protein sequence : 
MRYYGEEALGLVETLGMVPAIEAADKMLKAANVELISYENVGSTLVTIMIKGDVAAVTSAVEAGAEAAAAIGKLTAKNVM
PRPIREVGDIVSVHDVDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-12 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 8e-11 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1373 YP_001920765.1 microcompartments family protein VFG1596 Protein 3e-12 61
CLH_1373 YP_001920765.1 microcompartments family protein VFG1597 Protein 2e-11 60
CLH_1373 YP_001920765.1 microcompartments family protein VFG1598 Protein 3e-11 54