Gene Information

Name : CLH_1374 (CLH_1374)
Accession : YP_001920766.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1471561 - 1471866 bp
Length : 306 bp
Strand : +
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGGCAAGATATCAAGCTTTAGGATTAATTGAAACTTTTGGTCTAGTTTTTGTTTTAGAAGCAGCCGATGCTATGTGTAA
GGCAGCAGATGTTGAACTTGTAGGTTATGAAAATGTTGCATCAGGTTACATTTCTGTATTGGTTCGTGGAGATGTAGGAG
CATGTAAAGCGGCAGTAGAAGCTGGCGTAAAAGCTGTTCAAGATATGGAAAATGGCAATGTTTATAGCTCAGTTGTTATT
GCAAGCCCACATCAAGATCTTGAAAAGATTATTGCGCGTTATAAGATTGAAAATTTACTTCCATAA

Protein sequence : 
MARYQALGLIETFGLVFVLEAADAMCKAADVELVGYENVASGYISVLVRGDVGACKAAVEAGVKAVQDMENGNVYSSVVI
ASPHQDLEKIIARYKIENLLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 61
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-19 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-20 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1374 YP_001920766.1 propanediol utilization protein PduA VFG1597 Protein 9e-22 61
CLH_1374 YP_001920766.1 propanediol utilization protein PduA VFG1596 Protein 1e-19 61
CLH_1374 YP_001920766.1 propanediol utilization protein PduA VFG1598 Protein 2e-20 57