Gene Information

Name : CLH_1390 (CLH_1390)
Accession : YP_001920782.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1485773 - 1486063 bp
Length : 291 bp
Strand : +
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAAATTTGATGCATTAGGAATGATAGAAACAAAAGGATTAGTTGGTTCAATTGAGGCTGCAGACGCTATGGTGAAAGC
TGCAAATGTTTATTTAATAGGTAAAGAATATATTGGTGGTGGTCTTGTAACAGTTATGGTAAGAGGCGATGTAGGAGCTG
TAAAAGCTGCTACTGATGCAGGAGCTGCTGCTGCACAACGTGTTGGAGAATTAGTATCAGTTCATGTTATTCCACGTCCA
CATTCAGAAGTAGAGGTTATACTTCCATCAACTAAAGAAACTACAAAATAA

Protein sequence : 
MKFDALGMIETKGLVGSIEAADAMVKAANVYLIGKEYIGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HSEVEVILPSTKETTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 67
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-15 65
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1390 YP_001920782.1 microcompartments family protein VFG1597 Protein 1e-14 67
CLH_1390 YP_001920782.1 microcompartments family protein VFG1596 Protein 2e-15 65
CLH_1390 YP_001920782.1 microcompartments family protein VFG1598 Protein 7e-14 65