Gene Information

Name : CLH_1850 (CLH_1850)
Accession : YP_001921231.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1979146 - 1979802 bp
Length : 657 bp
Strand : -
Note : identified by match to protein family HMM PF06130

DNA sequence :
ATGGTTCAAGTAGATATAGAGAAAATAATATTAACTGTTACAAAAGCAGTTATAGAAGAATTGAATAAGTATAATGAAAG
TTTAATACCCGTAGGAATATCTAATAAGCATATTCATCTTGGATTAAGAGAACTTGAGGGCTTATTTGGAGAAAACTATA
AACCTAATATAAAAAAAGAGTTGAGACAGCCAGGACAATATGCATATGATGAAACAGTTGAAGCTAGAGGTCCGAAAGGA
TATTTTGAAAGAATAAGAGTACTTGGACCATTGAGAGAATCTACTCAATTAGAAGTTTCAATATCAGATGAAATGAAATT
AGGCATAAATGCGCCTATAAGACAATCAGGGAAACTTAGTGGTACTCCAGGAATATTACTTAAGGGACCCAAAGGTGAAA
TAAAAATAGATCAAGGTGTAATAATTGCTGCAAGGCATATTCATTTATCCACGGATTTTGCAAAAAAATATGGATATAGA
GATGGAGAGTTAGTGGATGTAACTAGTTACGGTCCAAGAAAAGTAACTTTTCACAATGTAATTATTAGGGTTTCAGATGA
TTTTGTACCGGAAATGCATATTGATACTGATGAAGCTAATGCTTCAGGATTAAAAAATGGTGATAAGATAAGAATTACTA
AAGTTGAAGGAGTTTAG

Protein sequence :
MVQVDIEKIILTVTKAVIEELNKYNESLIPVGISNKHIHLGLRELEGLFGENYKPNIKKELRQPGQYAYDETVEARGPKG
YFERIRVLGPLRESTQLEVSISDEMKLGINAPIRQSGKLSGTPGILLKGPKGEIKIDQGVIIAARHIHLSTDFAKKYGYR
DGELVDVTSYGPRKVTFHNVIIRVSDDFVPEMHIDTDEANASGLKNGDKIRITKVEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 2e-37 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1850 YP_001921231.1 propanediol utilization protein VFG1589 Protein 1e-37 49