Gene Information

Name : CLH_1851 (CLH_1851)
Accession : YP_001921232.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1979828 - 1980106 bp
Length : 279 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAAAGATGCATTAGGAATGGTAGAAACAAAAGGGTTAATAGGAGCCATAGAAGCAGCAGATGCTATGGTTAAAAGTGC
AAATGTAACATTAGTTGGATATGAAAAAATAGGATCAGGATTAGTAACTGTAATGGTAAGAGGCGATGTGGGAGCTGTTA
AAGCAGCAACAGATGCAGGTGCAGCAGCAGCACAAAAAGTAGGAGAAGTTGTATCAATACATGTAATACCAAGACCACAC
ATAGATACTGAAAAAATATTGCCACAATCTAATCTTTAA

Protein sequence : 
MKDALGMVETKGLIGAIEAADAMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAAQKVGEVVSIHVIPRPH
IDTEKILPQSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-15 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1851 YP_001921232.1 propanediol utilization protein PduA VFG1598 Protein 2e-13 68
CLH_1851 YP_001921232.1 propanediol utilization protein PduA VFG1596 Protein 2e-15 66
CLH_1851 YP_001921232.1 propanediol utilization protein PduA VFG1597 Protein 6e-14 66