Gene Information

Name : CLH_1852 (CLH_1852)
Accession : YP_001921233.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1980211 - 1980489 bp
Length : 279 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGCATGATGCATTAGGAATGGTAGAAACAAAGGGATTAATAGGGGCTATAGAGGCAGCAGATGCTATGGTTAAAAGTGC
CAATGTAATATTAGTAGGATATGAAAAAATAGGATCAGGATTAGTAACTGTAATGGTAAGAGGCGATGTAGGAGCTGTTA
AAGCAGCAACAGATGCAGGAGCAGCAGCAGCACAAAAAGTAGGAGAAGTTGTATCAATACATGTAATACCAAGACCGCAC
ATGGATACTGAAAAATTAATACCAAAAGTTGAAAATTAA

Protein sequence : 
MHDALGMVETKGLIGAIEAADAMVKSANVILVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAAQKVGEVVSIHVIPRPH
MDTEKLIPKVEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-13 67
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-13 65
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1852 YP_001921233.1 propanediol utilization protein PduA VFG1598 Protein 3e-13 67
CLH_1852 YP_001921233.1 propanediol utilization protein PduA VFG1597 Protein 3e-13 65
CLH_1852 YP_001921233.1 propanediol utilization protein PduA VFG1596 Protein 2e-14 63