Gene Information

Name : CLH_1855 (CLH_1855)
Accession : YP_001921236.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : iron-containing alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : 1.1.1.-
Position : 1982245 - 1983408 bp
Length : 1164 bp
Strand : -
Note : identified by match to protein family HMM PF00465

DNA sequence :
ATGAAAAGTTTTAAGGTTCCAGCACAAATATTGTATGAAGATAATGCTGTGCAACATTTAAGAGAATTAAAGTCAAAAGG
AATATTTATAGTTACTGATAAAGTTATGTCCAAACTTGGTGTAATCGATCCAGTAACAAGTATATTAAAAGAAAATGGAA
TAAATTATGAAGTATTTACAGAGGTAGAACCTGAACCAACAATGGAAGTAGTTACCCATGGATTTAAAAAATTTTTAGAT
TATGGCGCAGATACTATAATAGCTATAGGTGGTGGATCTGTAATTGATGCTTCAAAAGCTATGATTTATTTTTTAGATGT
ACTAAAGCAAAAATTACCTTCTTCAAATCAAGAGAAACCATATTTTATAGCGATTCCTACTACAAGTGGAACTGGATCAG
AAGTAACATCTTATGCAGTTATAACTGATTCATCAACTCATACTAAAATACCACTAAAAAGTGATGTTATGTACGCAGAT
GTTGCATTGTTAGATTGGAATTTCACGAAAAGTGTTCCGCCAACAGTAACTGCTGATACAGCGTTAGATGTATTAACTCA
TGCTCTTGAAGCGTATGTATCAGTAGGTTCATCAGAATATACTGATGCATTAGCCAAAGAAGCTATTTCTACAGTATTTG
ATTATACAGAAAAAGCATTTAAAAATGGAGCAGATCAAGAAGCAAGAATGAGAATTCATAATGCATCTTGTATGGCTGGA
ATAGCATTTGAAAATGCTGGACTTGGAATAAATCATAGTTTAGCTCATGCTTTAGGTGCAACTTTTGGAATAACTCATGG
TAGATCTAATGCAGTACTTTTGCCATATGTTGTAGAATATAATTCATCATTATTTGATGAAAATGATTGCTATGATTTTA
AGGCTGCTAAAAGATATACAGAGATAGCTAGGTTATTAGGATTACCACATACTGATTTTAAAGAAGGTGTAGTAATGTTT
GTTAAGGCTTTAAAAGCTTTGTTGCAATCTGTAAATATACCAATAAGAATAAAAGATTTCGGAATTGATGAGAGCTCATT
TAATTTAGCTATAGAATCAATGTGTAGTAGAGCGATGCAGGATATTTGTACTGGCGGAAATCCAAGAACTGCTGATGAAA
AAGGTTTAAGAGATATTTTAACTAAAGCTTATAATGGAAATTAA

Protein sequence :
MKSFKVPAQILYEDNAVQHLRELKSKGIFIVTDKVMSKLGVIDPVTSILKENGINYEVFTEVEPEPTMEVVTHGFKKFLD
YGADTIIAIGGGSVIDASKAMIYFLDVLKQKLPSSNQEKPYFIAIPTTSGTGSEVTSYAVITDSSTHTKIPLKSDVMYAD
VALLDWNFTKSVPPTVTADTALDVLTHALEAYVSVGSSEYTDALAKEAISTVFDYTEKAFKNGADQEARMRIHNASCMAG
IAFENAGLGINHSLAHALGATFGITHGRSNAVLLPYVVEYNSSLFDENDCYDFKAAKRYTEIARLLGLPHTDFKEGVVMF
VKALKALLQSVNIPIRIKDFGIDESSFNLAIESMCSRAMQDICTGGNPRTADEKGLRDILTKAYNGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 8e-68 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1855 YP_001921236.1 iron-containing alcohol dehydrogenase VFG1593 Protein 5e-68 43