Gene Information

Name : CLH_3323 (CLH_3323)
Accession : YP_001922657.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.1
Position : 3594700 - 3595626 bp
Length : 927 bp
Strand : -
Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780

DNA sequence :
ATGAAAAGAGCAACTAGAGAATCATATGGAGCAACTTTAGCTCAATTAGGAAATGAAAATAAAAATATAGTAGTATTAGA
TGCGGATCTTTCAAAAGCTACTAAATCAGAAATTTTTGCAAAAGCACATCCAGATAGATTTATTAATGTTGGTATAGCTG
AACAAAACATGATTGGAATGGCAGCAGGTATTGCAAGTGGTGGAAAAATACCTTTTGCTACTACTTTTGCAGTTTTTGCA
GCAGGTAGAGCATTTGAAGTAATAAGAAATTCAGTATGTTATCCAAATGTTAATGTTAAAATAGCTGCAACTCATGCAGG
AATAACAGTAGGTCCAGATGGTGGATCACATCAAGCAATAGAAGATATTGCACTTATGGCATCATTACCTAACATGGTAG
TTTTATCACCAGCTGATGATGTTGAAGCTTGCAAATGTATTAAAGCAGCTGCTGAAATTAAATCTCCTGTTTATATAAGA
TTGGGAAGAATTGCATTAGATGATATATATACAGAAGATTATGATTTTGAGATAGGAAAAGGAAGTACTTTAGTTGAAGG
AAATGATGTAACTATAATTGCAACTGGAATAATGGTTCATAAAGCATTAAAAGCAGCTGAAGAACTTAAAGCAGAAGGCA
TAAATGCTAGAGTTATAAATATTGCAACTATAAAACCAATAGATGAAGAAATAATAATAAAAGCAGCTAAAGAAACAAAA
GGAATTGTGACAGTTGAAGAACATTCAATAATTGGTGGGTTAGGTGATAGAGTAGCAAGTGTAGTTTGTGATAACCATCC
AACTATGGTTAAGAAAATAGGGGTTAATGATGTATTTGGGGAATCTGGAGATCCAGATGGATTATTAGAAAAGTATGGAT
TAACTGTTGAAAACATTAAGAAAGTATCTAAAGAATTAGTTAAATAG

Protein sequence :
MKRATRESYGATLAQLGNENKNIVVLDADLSKATKSEIFAKAHPDRFINVGIAEQNMIGMAAGIASGGKIPFATTFAVFA
AGRAFEVIRNSVCYPNVNVKIAATHAGITVGPDGGSHQAIEDIALMASLPNMVVLSPADDVEACKCIKAAAEIKSPVYIR
LGRIALDDIYTEDYDFEIGKGSTLVEGNDVTIIATGIMVHKALKAAEELKAEGINARVINIATIKPIDEEIIIKAAKETK
GIVTVEEHSIIGGLGDRVASVVCDNHPTMVKKIGVNDVFGESGDPDGLLEKYGLTVENIKKVSKELVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 2e-31 47
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 1e-34 43
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 1e-34 43