|
Name : clpB (PGN_1208) Accession : YP_001929324.1 Strain : Porphyromonas gingivalis ATCC 33277 Genome accession: NC_010729 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1344903 - 1347494 bp Length : 2592 bp Strand : - Note : AAA, PG1118; similar to gb|AAQ66228.1, percent identity 99.9 in 863 aa, BLASTP E(): 0; may be inner membrane protein DNA sequence : ATGAACATTAACAACTACACAATCAAATCGCAGGAGGCTCTACAGCAGGCTGTGGAGCTGACCCGTCGGCACGGACAGCA GGCCATCGAACCGCAGCACCTGCTCAAGGCCGTTATGGATCAGGGCGAAAGCCTGACCGATTTCCTTTTTGCCAAGATGG GGCTGAACAAGGGCAGTATTGCCACGGCTGTGGACAAACTGATAGAGAAACTGCCCCATGTATCGGGTGGCGAACCCTAT CTGTCGCATGAGACCAACCAGGTGCTACAGGTAGCAGAGGACGCAGCGCACCGGATGAAGGACAAATACGTCTCTTTGGA GCACATCGTGCTAGCTATTCTGACTACGCGATGCGAGGCGTCCACTCTGCTCAAGGATGCCGGAGCCACCGAACAGCTTC TGCAGTCGGCCATCGAAGAGCTTCGGAAGGGGCGCAACGTGACCAGTCAGAGTGCGGAGGAACAGTACAATGCACTGGAG AAATATGCCGTCAATCTCTGTCAGCGTGCTCGCGATGGCAAGTTGGATCCCGTGATCGGTCGCGATGACGAGATCAGGCG AGTGCTGCAAATTCTCTCTCGACGCACCAAGAACAATCCTATCCTTATCGGTGAGCCGGGGGTGGGCAAGACGGCCATAG CCGAGGGCTTGGCTTACAGGATCGTGCGTGGCGACGTGCCGGAGAATCTGCGCAACAAGCAGATATTCTCTCTCGACATG GGTGCCTTGATCGCCGGAGCCAAATACAAAGGTGAATTCGAGGAAAGGCTGAAAGCCGTGGTAAACGAAGTGACTGGTGC CGAGGGGGAAATCATCCTTTTCATAGATGAGATCCACACCCTTGTCGGAGCCGGCAAGAGCGAAGGTGCGATGGACGCTG CCAATATACTGAAGCCGGCCCTGGCTCGGGGCGAACTCCGTGCCATCGGTGCCACCACGCTGGACGAATACCGCAAATAC TTCGAGAAGGACAAGGCTCTGGAACGACGCTTCCAGATGGTGATGGTGGACGAGCCGGACGAGCTAAGCTCCATCTCCAT CCTCCGGGGTTTGAAGGAGAAATACGAGAATCACCACAAAGTGCGGATCAAGGATGATGCCATCATTGCGGCCGTGAAGT TGTCGCACCGCTACATTACGGAGCGGTTCCTGCCCGACAAGGCCATCGACCTGATGGATGAGGCTGCGGCTCGTCTGCGT ATGGAAGTGGATTCGCTGCCGGAGGAGCTGGACGAGATCTCGCGCAGGATCAAGCAACTTGAGATCGAACGCGAAGCCAT CAAGCGAGAGAATGACGAGGAGAAGGTACAGTTCCTCGACAGGGAAATAGCCGAACTCAAGGAGAAAGAGGCCTCGGAGA AAGCCCAATGGCAGAATGAAAAAGATCGGATCAATCAGATTCAGCAGCTCAAGATAGATATAGAGGAGCTGAAGTTTCAG GCCGATCGTGCCGAACGAGAGGGCGACTACGGACGAGTGGCCGAGATACGCTACGGACTCATCAAGCAGAAAGAGACGGA GATCGACACGATACAGCAACAGCTGCACGAATTGCAGCGTGGCGGCTCCATGATCAAGGAGGAAGTGGAGGCCGACGACA TAGCCGACATCGTGTCGCGCTGGACGGGTATCCCCGTCAGCCGCATGCTCCAGAGCGAGCGCGACAAGCTGCTTCATCTG GAGGACGAGCTGCATAAGCGCGTGATCGGTCAGGACGAAGCCATCCGTGCCGTGGCCGATGCCGTCCGTCGCAGCCGGGC AGGCCTTCAGGATCCCAAGCGTCCGATCGGTTCGTTCATCTTCCTCGGTACTACGGGGGTGGGCAAGACGGAGTTGGCAC GTGCCTTGGCCGAATTGCTCTTCGATGATGAGAGCATGCTTACGCGAATAGACATGAGCGAGTATCAGGAGAAGTTCAGT GCCACGCGTCTGATCGGTGCGCCTCCGGGGTATGTGGGCTATGACGAGGGTGGCCAACTGACGGAAGCCATTCGCCGCAA GCCTTATTCCGTAGTGCTTTTCGATGAAATAGAAAAAGCTCACCCGGATGTGTTCAACGTATTGCTGCAAGTCCTCGACG ATGGCCGCCTGACCGACAACAAGGGGCATGTGGTAAACTTCAAGAATACGCTCATCATCATGACGTCGAACCTCGGTTCG GACATCATTCGCGAGCGGATGCAGAACCTCACGGCGGAGAATCGCCGGTCCCTCACGGCCCGGACGGCCGATGAGGTGAT GCAGCTACTCAAGCATACGATCCGCCCCGAGTTTCTGAACCGTATCGACGAGACCATAGTCTTCACGCCACTGACCGAGA AGGAGATCTACGAGATCGTCCGCTTGCAGCTCGATGGTATCGTGCGCCAACTGGCCGATAACGACGTGGTGCTCCACTAT ACGGAGGCTGTCGTAACCTTTGCCGCTCGCGAGGGATATGATCCGCAGTTCGGAGCGCGTCCTGTGAAGCGAGTCCTGCA GCGATTCGTCCTCAACGAACTGAGCAAGGCACTCTTGGCCGATACGGTGGACAGTACACGTCCCGTCCTCATCGATTGCA TAGACGGGTCAATCGTCTTCCGCAACGAATAG Protein sequence : MNINNYTIKSQEALQQAVELTRRHGQQAIEPQHLLKAVMDQGESLTDFLFAKMGLNKGSIATAVDKLIEKLPHVSGGEPY LSHETNQVLQVAEDAAHRMKDKYVSLEHIVLAILTTRCEASTLLKDAGATEQLLQSAIEELRKGRNVTSQSAEEQYNALE KYAVNLCQRARDGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLAYRIVRGDVPENLRNKQIFSLDM GALIAGAKYKGEFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELRAIGATTLDEYRKY FEKDKALERRFQMVMVDEPDELSSISILRGLKEKYENHHKVRIKDDAIIAAVKLSHRYITERFLPDKAIDLMDEAAARLR MEVDSLPEELDEISRRIKQLEIEREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQLKIDIEELKFQ ADRAEREGDYGRVAEIRYGLIKQKETEIDTIQQQLHELQRGGSMIKEEVEADDIADIVSRWTGIPVSRMLQSERDKLLHL EDELHKRVIGQDEAIRAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELARALAELLFDDESMLTRIDMSEYQEKFS ATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDNKGHVVNFKNTLIIMTSNLGS DIIRERMQNLTAENRRSLTARTADEVMQLLKHTIRPEFLNRIDETIVFTPLTEKEIYEIVRLQLDGIVRQLADNDVVLHY TEAVVTFAAREGYDPQFGARPVKRVLQRFVLNELSKALLADTVDSTRPVLIDCIDGSIVFRNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-109 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-100 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001929324.1 | ClpB protein | VFG2076 | Protein | 7e-124 | 44 |
| clpB | YP_001929324.1 | ClpB protein | VFG2084 | Protein | 7e-108 | 42 |
