Gene Information

Name : SYO3AOP1_1576 (SYO3AOP1_1576)
Accession : YP_001931728.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1630293 - 1630964 bp
Length : 672 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC01821 ABC transporter ATP-binding protein

DNA sequence : 
ATGATTAAGGCAGAAAATATTAAAAAGATTTATCAGACAAACGGCGATAGGGTTTTAGCTTTAAGAGGTATTTCTCTAAA
CATAGAAAAAGGTTCAATGGTTGCAATAATAGGGCCATCCGGGTCGGGAAAAAGTACGCTGTTGCACATACTTGGTGGTA
TAGATTATCCAACAGAGGGAAAAGTTGAGATTGACAGTGTAGATATTACAAATCTAAAAGATAAACAGCTTGCAGAATTT
AGAAATAAAAACATTGGCTTTGTTTTTCAGTTTCATTATTTACTTCCGGAGTTTACTGCTTTAGAAAATGTCTCTTTGCC
GGCTTATTTAGCAGGAGATAAAAATGCAGAAAGTAAAGCGGTAGATATACTGACAAAACTAAATCTAAAAGATAGAATAA
ATCATAAACCTTCTCAGCTTTCAGGCGGAGAACAGCAGAGAGTGGCTATTGCAAGAGCTATAATCAACAATCCAAAGGTT
TTGATAGCAGATGAGCCAACAGGCAATCTCGATTCTCAAAATGCTAAGAATGTTATAATGTTAATCAAAGAGCTAAATGA
GAGTTTTGATATGACTGTTATCATCGCAACCCATGATGTTGAAATAGCAAAATATTGTGATTATATTTACCATATAAAAG
ATGGTATGATTGAAAGAATTGAAAAAATATAA

Protein sequence : 
MIKAENIKKIYQTNGDRVLALRGISLNIEKGSMVAIIGPSGSGKSTLLHILGGIDYPTEGKVEIDSVDITNLKDKQLAEF
RNKNIGFVFQFHYLLPEFTALENVSLPAYLAGDKNAESKAVDILTKLNLKDRINHKPSQLSGGEQQRVAIARAIINNPKV
LIADEPTGNLDSQNAKNVIMLIKELNESFDMTVIIATHDVEIAKYCDYIYHIKDGMIERIEKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1576 YP_001931728.1 ABC transporter CP001581.1.gene798.p Protein 1e-40 46
SYO3AOP1_1576 YP_001931728.1 ABC transporter CP001581.1.gene598.p Protein 5e-39 44
SYO3AOP1_1576 YP_001931728.1 ABC transporter NC_012469.1.7686878. Protein 1e-38 44
SYO3AOP1_1576 YP_001931728.1 ABC transporter NC_008702.1.4606598. Protein 2e-32 43
SYO3AOP1_1576 YP_001931728.1 ABC transporter NC_012469.1.7685735. Protein 3e-37 43