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Name : clpB (TPASS_0071) Accession : YP_001933077.1 Strain : Genome accession: NC_010741 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, subunit B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 75903 - 78539 bp Length : 2637 bp Strand : - Note : - DNA sequence : ATGAACACAGACAGGTACACAGTCAAAGCAAGCGAAGCGCTCAATGACGCCATATCTCTGGCAGAAGCGGAGAACCACGG TCAAGTTGAGGAGGAACATCTACTCCACGCCCTACTTTCCCAGAAAGACGGGATTATCTCTCCGCTCATTGAAAAAATTG GGGCAAAACCGGACTTCCTGTACGATGAATTACTCCAATGCCTGCGCCGCAAACCACGTGTTACCGGTCCTGCCGCCCAA ACGCGCTGTGCACCAACGCTGAGCAAAGCCTGTGCACGTGCAGAACGCCTCGCGCTCAAGAACCAAGATGAATATGTCTC CTGCGAACATCTCCTGCTTGCCATAAGTGAGACAGATAGCAACACTGCACGTCTCCTTCACAGTCAGGGCATTACCAGTA AAACTATCAGTGCCGCCCTCAAAGATATACGCGGCAGCAAGCGCGTTACGAGCCAGGATCCAGAATCAACATTCCAGTGC TTGGAGAAATACTGCCGAGATCTTACTACCCTCGCCCGAGAAGAAAAAATAGATCCGGTTATTGGACGTGATGAAGAGAT CCGGCGCGTTATGCAGGTACTCTCACGTCGTACAAAAAATAACCCAGTGCTTATTGGAGAACCCGGCGTAGGGAAAACCG CTATTGTCGAGGGACTTGCACGCCGTATCGTTTCAGGAGACGTACCAGAAAGCCTCAAGGGAAAGCGTTTGCTTTCCCTT GACCTCGGCGCATTGGTTGCCGGTGCAAAGTTCCGCGGGGAATTTGAAGAACGACTAAAAGCGGTAATTGAAGCGGTACA GAAAAGCGACGGTGGCGTTATTTTATTCATTGATGAACTACACACGCTCGTAGGCGCCGGCGCAAGTGAGGGATCTATGG ATGCGTCGAACCTTCTGAAACCTGCGCTTGCGCGCGGTGAATTGCGTTCAATCGGCGCAACCACGCTCAACGAATATCGC AAATATATCGAAAAGGACGCAGCGCTCGAACGCCGCTTTCAGCAAGTGTACTGCGTACAGCCTACGGTGGAGGACACCAT TGCTATCCTGCGCGGTTTGCAAGAAAAGTACGAAGTGCATCACGGGGTACGTATCAAAGATGAAGCGCTTGTTGCAGCAA CCGTTTTGTCTGACCGTTACATCACCAACCGCTTTTTACCAGATAAGGCGATTGATCTGGTGGATGAAGCAGCAAGCCGC CTGAAAATGGAAATTGAAAGTCAGCCTGTTGAGCTAGACCAGGTGGAGCGCAAGATATTACAGCTGAATATCGAAAAGGC CTCTCTCCTTAAAGAAAGTGATCCGGCTTCAAAGGAACGTTTGGAAAAGTTAGAAAAAGAGCTCGCAGGCTTCCTAGAGC GCCGTGCTGCAATGCAGGTCCAATGGCAAAATGAGAAAGGGAGGATAGAAGAGTCACGCCGCTACAAAGAGGAGCTTGAG CGTCTCCGCATTGAGGAAACCATGTTTTCACGTGAAGGGGACCTGAACAAGGCTGCAGAACTTCGGTATGGCAAAATTCC AGAACTTGAAAAAAAAATCATGCTTCTTACTGCAGAAGTAGAGAAAAAATCCGGTCTAGAAGGACAGCTCTTGCGCGAGG AAGTGTGTGAAGAGGACATTGCGAAAATTATTTCTATGTGGACCGGAATTCCGGTATCCAAAATGATGGCAAGCGAGCAA CAGAAATATCTGCAGCTTGAGTCAGTACTCATGCAACGTGTGGTAGGGCAGGACGAAGCAGTGCGGGTAATTTCCGACGC GATTCGTCGTAATAAGGCAGGACTTTCTGATACGCGCCGTCCTCTTGGCAGTTTCTTATGTGTCGGTCCCACGGGGGTAG GAAAGACAGAACTTGCACGTACGTTAGCTGATTTTCTTTTCAACGATGAGCGTGCACTGACGCGTATCGATATGAGTGAA TACATGGAAAAACACGCGATCAGCCGACTCATTGGCGCGCCCCCGGGGTATGTGGGCTATGACGAGGGGGGACAATTGAC AGAAGCGGTACGACGTAGACCCTACAGCGTACTTCTTTTTGATGAAGTAGAGAAAGCGCACCAGGATGTGTTTAATATAT TCCTGCAAATACTCGACGATGGGCGCTTGACTGACGGCCAAGGAAGGGTGGTGGATTTCCGCAACACGATCATCATCATG ACCAGCAATATCGGATCAGAGCATATTCTTTCTGCACGCGAGTCGCGCACACACACGTCGGACTTGCCTGTACCCGAGAC ACAATCTACAGAAGAACAAACTCTACCAGAGCAGATACGGGGATTACTGCACACATACTTTCGCCCAGAATTCTTAAACC GGATTGACGAAGTGTTAATTTTTAAGCGTCTCACACGGAAACATATTCGCCTCATCACAGACATCCAACTGCAGATGGTA GTGGAGCGTTTGGAAAGTCGACATATAAAACTTCGTGTGCGTGACGCGGCGAAAGCCTATCTTGCGGAGCGCGGATACGA CGACACTTTCGGAGCACGACCACTGAAGCGTGCAATCCAAACGGAATTGGAAAATGCCCTAGCGCGTGAGATTCTCAGTG GCCGATTCAGAGGCGGCTCAACTATCGTGGTGGATATGTGTAAAGATGCTCTGTGTTTCACTGAACAAACATCCTGA Protein sequence : MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFLYDELLQCLRRKPRVTGPAAQ TRCAPTLSKACARAERLALKNQDEYVSCEHLLLAISETDSNTARLLHSQGITSKTISAALKDIRGSKRVTSQDPESTFQC LEKYCRDLTTLAREEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSL DLGALVAGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRSIGATTLNEYR KYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVHHGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASR LKMEIESQPVELDQVERKILQLNIEKASLLKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELE RLRIEETMFSREGDLNKAAELRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDIAKIISMWTGIPVSKMMASEQ QKYLQLESVLMQRVVGQDEAVRVISDAIRRNKAGLSDTRRPLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSE YMEKHAISRLIGAPPGYVGYDEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIM TSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMV VERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILSGRFRGGSTIVVDMCKDALCFTEQTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001933077.1 | ATP-dependent Clp protease, subunit B | VFG2084 | Protein | 8e-103 | 43 |
| clpB | YP_001933077.1 | ATP-dependent Clp protease, subunit B | VFG2076 | Protein | 7e-112 | 41 |
