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Name : rnhA (OTT_1250) Accession : YP_001937942.1 Strain : Orientia tsutsugamushi Ikeda Genome accession: NC_010793 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1281529 - 1282035 bp Length : 507 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGATTGACTATGCTTGCTCTGCTACTAATAACATTCCAGTTAAGATATATACAGATGGTGCGTGCAGCGGTAATCCAGG ACCAGGAGGTTGGGGTGTATATTTAAGTTATAAGAATCATGAAAGAAAAGTTTATGGATCTAACATAAATACTACAAATA ATAGAATGGAGTTAACAGCAACAATAGAGGCGTTGCGGCTTCTTAAGTATAGCTGTAAAGTAGAATTATATACTGATAGT CAGTATGTTCAAATGGGTATTACTAAATGGATAAAAAAGTGGATAAAAAATAATTGGGAAACAAGCAATAAGCAATTGGT TTGTAATGTTGATTTATGGCAGTCGTTATATACTTTGATTCAAAAACACCAAGTTAGTTGGCATTGGGTGAGAGGACACT CTGGCAATATAGGTAATGAAATTGCTGATAAATTAGCAACTAATGGAAAAATTGAAGCAATGAAAATAGTTAAAAATAAT GAAAATACTAAGAAATTTCTTGATTAG Protein sequence : MIDYACSATNNIPVKIYTDGACSGNPGPGGWGVYLSYKNHERKVYGSNINTTNNRMELTATIEALRLLKYSCKVELYTDS QYVQMGITKWIKKWIKNNWETSNKQLVCNVDLWQSLYTLIQKHQVSWHWVRGHSGNIGNEIADKLATNGKIEAMKIVKNN ENTKKFLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-23 | 52 |
