Gene Information

Name : rrs(16) (OTT_RNA006)
Accession : -
Strain : Orientia tsutsugamushi Ikeda
Genome accession: NC_010793
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 379135 - 380647 bp
Length : 1513 bp
Strand : -
Note : -

DNA sequence : 
TTAAGTATCAAACTTAAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGAAT
TAATGCTGAGCTTGCTTAGCATTAATTAGTGGCAAACGGGTGAGTAACACGTGGGAATCTGCCCATCAGTACGGAATAAC
ATTTAGAAATAAGTGCTAATACCGTATGCCCTCTACAAGGAGGAAAGATTTATCGCTGATGGATGAGCCCGCGGCAGATT
AGGTAGTTGGTAAGGTAATGGCTTACCAAGCCTGTGATCTGTAGCTGGTCTGAGAGGACGAACAGCCACACTGGGACTGA
GACACGGCCCAGACTCCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGT
GAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTTAGTAGGGATGATAATGACAGTACCTACAGAAAAAGCCCCGGCTAA
CTCCGTGCCAGCAGCCGCGGTAAGACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGTT
TAATAAGTTAGGAGTGAAATCCCGGGGCTTAACCCTGGAACTGCTTCTAAAACTGTTAGGCTAGAGTGTGGTAGAGGATG
ATGGAATTTCTAGTGTAGAGGTAAAATTCTTAGATATTAGAAGGAACACCAGTGGCGAAAGCTGTCATCTGGGCCATTAC
TGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGA
TATTGGGGGATTTTTCTTTCAGTTTCGTAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACT
CAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGCGGTTTAATTCGATGATCCGCGAAAAACCTTACCAACTCT
TGACATGGTAGTCGCGAAAAATGGAGACATTTTTCTTCAGTTTGGCTGGACTACACACAGGTGTTGCATGGCTGTCGTCA
GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTCTTATTTGCCAGCGGGTAATGCCGGGAA
CTATAGGAAAACTGCCGGTGCTAAGCCGGAGGAAGGTGGGGATGAGGTCAAGTCATCATGGCCCTTATGAGTTGGGCTAC
ACGCGTGCTACAATGGTACCTACAGAATGATGCAATACGGTAACGTGGAGCTAATCATTAAAAGGTATCTCAGTTCGGAT
TGCACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGG
CCTTGTACACACTGCCCGTCGCACCATGGGAGTCAGTGGTACCTGAAGTTGGTGAGCTAACGTAAGAGGCAGCTAACCAC
GGTAGAACTGGTGACTGGGGTAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATTACCTCCTTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-128 87.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-128 87.8
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-128 86.6
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-128 86.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-128 86.5
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-128 86.5