|
Name : glcD (Minf_0895) Accession : YP_001939548.1 Strain : Methylacidiphilum infernorum V4 Genome accession: NC_010794 Putative virulence/resistance : Unknown Product : glycolate oxidase, subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 849783 - 851273 bp Length : 1491 bp Strand : + Note : - DNA sequence : TTGCTATTAATTAGGGATAAGCGGATAAAAAGTATGCCCAAACAAAGCGAGTTGATAAGGTCTCTTTTGGCCCTGTTTGA TGAAAAAAAAATGATCTATGATCCAGAGAGGCTTACCGCCTATGAGTGTGATGGGCTCACCGCTTTTCGAGCTTTGCCCC TGGCCGTCTTGATCCCAGACAGTATCGAGGAGATTCTTGCCGTAGTGGAGGTTTGTAACCGCTATCAGGTTCCCCTCGTT GTCAGGGGAGGAGGAACGGGGCTTTCAGGAGGGGCAACCCCGATCGAAGGAGCCTTGGTGCTTAGCCTTGCTAGGCTTAA CCGGGTATTGGAAATCGATCCTCAAAATCGAACGGCAAGGGTAGAGCCGGGGGTGACCAATATTCGGGTCAGCCAAGAAG CAGCTCCTTACGGGCTCTATTATTCTCCCGATCCTTCCTCCCAGCTGGCGTGCACGATTGGAGGAAATATTGCCGAGAAT GCGGGAGGAATACATTGTTTAAAGTACGGGTTGACGGTCAACAACGTGCTCGGACTGAAATTGATCACGATGGAAGGAGA AATATTATCCATTGGAGGAAAAGCAGCAGAGAGTCCAGGCTACGATCTTTTGCCCTTGATAGTCGGCTCGGAAGGGTTGC TTGGAATAATTGTCGAGGCGACTTTGCGCCTGCTTCCCAAGCCGGAGTCTGCCCGGCTTGTTGTAGGTTGTTTTGACGCC GTAGCCAAGGCAGCCCAAACCGTCAGCCTTGTCCTTTCTTCGGGAATCATTCCCGCCGGGCTTGAAATGATGGATAAGCT TGTCCTCGATGCGGTTCAGTCTTTTGTTCCTGAAACTCTCCCGAGTTCAGCTCAAGCCGTCCTTCTTTGCGAGCTCGACG GGATGGTCGAAGAGGTTGAAGAGCAGAGCCTACGGGTTAAGCATATAATGACTAAGGCGGGAGCCGATGAAATCATTGTT TCTGGAGATGACGCCCAGAGAATGCGCCTTTGGAAGTGCAGGAAATCAGCCTTTCCGGCAATGGGTAGAATTTCACCCGA TTATTATTGCATGGACGGGACAATCCCGAGAAAAAAACTGGGTTACTTGCTGGGAAAGATCGCAGAACTGTCCGATCAAT ATAATCTTAAGGTGGGAAACGTGTTTCATGCGGGCGACGGCAATCTCCATCCCCTTATTCTCTATGATCAGAGCATCCCC GGGGAGCTGGAAAAAGTGGAGAGTATGGGTGAAAAGATCCTGGAGCTTTGCGTTCAGGTTGGAGGATCCATAACGGGAGA ACACGGGGTGGGGTTAGAAAAGCTGGGCCCGATGTGTTCCCAATTTTCCGCGGAAGAAATTGCACAGTTCCAGAGAGTAA AAAAGGCTTTCGATCCCCATTGCTTGCTGAACCCCGGCAAAGCGATCCCCACCCTTCATCGCTGCGCGGAATGGGGAAAG ATGCATGTCCATGGGGGAAAAGATCCTTTCCCCGGTTTGGAAAGGTTTTAA Protein sequence : MLLIRDKRIKSMPKQSELIRSLLALFDEKKMIYDPERLTAYECDGLTAFRALPLAVLIPDSIEEILAVVEVCNRYQVPLV VRGGGTGLSGGATPIEGALVLSLARLNRVLEIDPQNRTARVEPGVTNIRVSQEAAPYGLYYSPDPSSQLACTIGGNIAEN AGGIHCLKYGLTVNNVLGLKLITMEGEILSIGGKAAESPGYDLLPLIVGSEGLLGIIVEATLRLLPKPESARLVVGCFDA VAKAAQTVSLVLSSGIIPAGLEMMDKLVLDAVQSFVPETLPSSAQAVLLCELDGMVEEVEEQSLRVKHIMTKAGADEIIV SGDDAQRMRLWKCRKSAFPAMGRISPDYYCMDGTIPRKKLGYLLGKIAELSDQYNLKVGNVFHAGDGNLHPLILYDQSIP GELEKVESMGEKILELCVQVGGSITGEHGVGLEKLGPMCSQFSAEEIAQFQRVKKAFDPHCLLNPGKAIPTLHRCAEWGK MHVHGGKDPFPGLERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 5e-133 | 57 |
