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Name : cobT (Clim_1079) Accession : YP_001943127.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 1182900 - 1183970 bp Length : 1071 bp Strand : + Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGACATTGCTTGAGCAGTTTGCATGCCTGCTGGACGGGATCAGGCCGGTTGACCGGTCGCTGGTGCCGGTAATTCAGGC CCATCTTGACGATCTTACCAAACCGCAGGGCAGCCTTGGCCGTCTTGAGGAGATTGCCATGAGCTATGCCCTTGCGACCG GTTCTCCGGTTCCTGTGCTCGATAAAAAGAAAATATGCTGCTTTGCCGCCGATCATGGCGTGGCTGCCGAAGGAGTATCG GCTTTTCCGGCGGAAGTCACCCCGCAGATGGTGTATAACATGGTGCAGGGGGGAGCTGCCATCAATGTGCTTTCAAAACA TGCCGGAGCCGATCTCGATGTTGTGGATGTCGGGGTCAATCATGATTTTCCCGATATGCCGGGACTTATCCGGAAAAAGG TGGGGTATGGCAGTTCCAATATTTCCAGCGGTCCGGCAATGAGCGAAACGGAAACGCTTCAGGCTGTCCTGTGCGGAGCC GAGCTTGCCGTTGATGCGCATAAATCAGGATACCATCTGCTTGGAACCGGTGAAATGGGCATTGCCAATACGACTCCGGC AACGGCACTCTTTTCCGTATTGCTCGGCGTTTCTCCCGAAACCATTACCGGAAAGGGTACCGGGATTGACGATAGTAGAC TGGAACACAAAAAAAAGATCGTCAGGAAAGCAATCGAGGTCAATGCATCGCGATGCTCTACGCCGTTCGGGACGCTTGCC GCACTCGGAGGATATGAAATTGCAGCTATCTCGGGTTTTGTGCTTGGAGCCGCCTCATGCAGGCTTCCGGTTGTTGTCGA TGGATTTATCTCCTCATCGGGTGCGGTTGCCGCCATGAAGATCTGCCCTTCGGTGATCGATTATATTTTTTTCAGCCACC TCTCGAATGAACAGGGGCATAGAGCCGTTATGCAGCAGCTTGGCGCTCGGCCGATCCTTGATCTCGATCTCCGTCTGGGT GAAGGAACCGGAGCGGCCCTTGCCATGCAGGTAATTGCAGGTGCCGTGAAACTGTATAATGAAATGGCGACATTCAGTTC GGCAAGGATAAGCGAAAAAGAGACAGTCTAA Protein sequence : MTLLEQFACLLDGIRPVDRSLVPVIQAHLDDLTKPQGSLGRLEEIAMSYALATGSPVPVLDKKKICCFAADHGVAAEGVS AFPAEVTPQMVYNMVQGGAAINVLSKHAGADLDVVDVGVNHDFPDMPGLIRKKVGYGSSNISSGPAMSETETLQAVLCGA ELAVDAHKSGYHLLGTGEMGIANTTPATALFSVLLGVSPETITGKGTGIDDSRLEHKKKIVRKAIEVNASRCSTPFGTLA ALGGYEIAAISGFVLGAASCRLPVVVDGFISSSGAVAAMKICPSVIDYIFFSHLSNEQGHRAVMQQLGARPILDLDLRLG EGTGAALAMQVIAGAVKLYNEMATFSSARISEKETV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-51 | 42 |
