Gene Information

Name : Glov_0544 (Glov_0544)
Accession : YP_001950792.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 515896 - 516555 bp
Length : 660 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_1552 ABC transporter-related protein

DNA sequence : 
ATGATAACCGCACACCATATAACCAAAGAGTATCCCTCCGGCGAAGGCGCCGTAGCAGCACTCCGGGGGGTCGATCTGAC
AGTGGAGACCGGCGAGTTTGTCTGTATCATGGGGCAGTCCGGCTCCGGCAAGAGCACCCTGCTGACCATTCTGGGGGGGA
TGTGCCACCCCGGCAGCGGCAGCGTCGAAGTGGACGGCACGGCCATCTACAGGCTTGATGACAACGGCCTGGCAGATTTT
CGCGCAAGGCATTTCGGTTTTATCTTCCAGTCCTTTCATCTGGTGCCCTACCTGACAGCACAGGAAAACGTCATGCTGCC
GCTGGCCCCGCTGGCCATGGCCGCTGCGGAAAAACGGCGTCTGGCAAATGACGCTCTGGCACGGATGGGGCTGGCCGGCT
GCACCGGGCGCCTGCCCGGCCGGCTGTCCGGTGGGGAACAGGAACGGGTTGCAATCGCGCGGGCCGTGGTCAACCGTCCG
GCAATCCTGTTTGCCGATGAGCCGACCGGCAATTTGGACAGTGCCACCAGCGACCAGGTCATGGGGCTTTTTACAGAGCT
GCACCAGGCGGGCCAGACCATCGTGATGGTCACCCACAACCCGGATAACGGCCACTACGCTCAGCGGACGATCCGCCTGA
AGGATGGGCTGCTGCTCTGA

Protein sequence : 
MITAHHITKEYPSGEGAVAALRGVDLTVETGEFVCIMGQSGSGKSTLLTILGGMCHPGSGSVEVDGTAIYRLDDNGLADF
RARHFGFIFQSFHLVPYLTAQENVMLPLAPLAMAAAEKRRLANDALARMGLAGCTGRLPGRLSGGEQERVAIARAVVNRP
AILFADEPTGNLDSATSDQVMGLFTELHQAGQTIVMVTHNPDNGHYAQRTIRLKDGLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0544 YP_001950792.1 ABC transporter NC_008702.1.4606598. Protein 9e-35 46
Glov_0544 YP_001950792.1 ABC transporter CP001581.1.gene598.p Protein 3e-37 45
Glov_0544 YP_001950792.1 ABC transporter CP001581.1.gene798.p Protein 5e-40 43
Glov_0544 YP_001950792.1 ABC transporter NC_012469.1.7686878. Protein 4e-43 43
Glov_0544 YP_001950792.1 ABC transporter NC_012469.1.7685735. Protein 7e-31 41