Gene Information

Name : Cphamn1_1178 (Cphamn1_1178)
Accession : YP_001959593.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1269477 - 1270460 bp
Length : 984 bp
Strand : +
Note : PFAM: Transketolase central region; Transketolase domain protein; KEGG: plt:Plut_1286 transketolase-like

DNA sequence :
ATGGCAGAACAAAACATCATGGCTGAGGCCGTGAAATATGTTTCGCGCGGATCAGTCGCTACCCGCAAAGGATTTGGTGA
CGCCCTTCTGGAGATCGGCAGGCAGGATCCTGATGTCGTGGCCTTGTGCGCTGATCTGACCGGATCACTCCAGATGCATC
ATTTTCAGAAAGAGTTTCCCTCCCGTTTTTTTCAGGTCGGAATTGCCGAGGCGAACATGATATCCATTGCCGCCGGTCTG
GCAACTACAGGAAAAAAACCGTTTGCCGGGACTTTTGCCGCTTTTGCCTCAGGGAGGGTATACGACCAGATCCGTCAGTC
GATCTGCTATTCCCGTCTCAATGTCAGGATATGCGCCTCACACGCAGGCCTTACTCTCGGAGAGGACGGCGCGACGCACC
AGATGCTTGAAGATATTGGTCTCATGCGCGGATTGCCAGGAATGACCGTTGTCGTTCCTGCTGATTACAGCGAAACAAAA
CGGGCCGTGAAAGCGCTGCACAAACATGAAGGTCCTGCCTATCTGCGATTCGGAAGGCCTTCTGTTCCGGATTTCACCCT
TGATGATGATGGTTTCGAGATAGGAAAATCAATCGAACTGAACTCTGGAAAAGATGTAACGGTTATTGCTTGTGGCATCA
TGGTATGGCAAGCGCTCGAGGCGGCCCGTATACTTGAAAAAGAAGGGGTTACTGTACGAGTGATCAATATGCATACGATC
AAGCCTGTCGATAAGCTGGCTATTGTCCGTGCGGCAAACGATACCGGTGCAATTGTTACCGCCGAGGAGCATCAGGTTCA
TAATGGTCTCGGTGACGCGGTGGCTCATGTGTGCGCGGAAACGATTCCGGTGCCTATTGAGATGGTTGGAGTCGAAGATG
TGTTCGGTGAGTCAGGGAAGCCGGATGAGCTGATGAGTAAGTATAATCTGGCAATTGAAGATATTCTTGAAAAGATATAC
CTGGCACTGCGCAGGAAAGAGTAA

Protein sequence :
MAEQNIMAEAVKYVSRGSVATRKGFGDALLEIGRQDPDVVALCADLTGSLQMHHFQKEFPSRFFQVGIAEANMISIAAGL
ATTGKKPFAGTFAAFASGRVYDQIRQSICYSRLNVRICASHAGLTLGEDGATHQMLEDIGLMRGLPGMTVVVPADYSETK
RAVKALHKHEGPAYLRFGRPSVPDFTLDDDGFEIGKSIELNSGKDVTVIACGIMVWQALEAARILEKEGVTVRVINMHTI
KPVDKLAIVRAANDTGAIVTAEEHQVHNGLGDAVAHVCAETIPVPIEMVGVEDVFGESGKPDELMSKYNLAIEDILEKIY
LALRRKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 4e-41 44
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 3e-35 44