|
Name : APP7_1108 (APP7_1108) Accession : YP_001968902.1 Strain : Actinobacillus pleuropneumoniae AP76 Genome accession: NC_010939 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein NrfE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1254329 - 1256245 bp Length : 1917 bp Strand : - Note : - DNA sequence : ATGCTTCCTGAGTTGGGTTATTTTGCGTTAATTTTTGCAGCGGTTGTCGCTGTTTGCCAAGTAGGGCTGTCCTTGTGGGG AGAGATCACTAAGAAAACGAATTTTCTTCGATACAATGCGTTGTTGAACAGCCTGCAAACGGTAGGTTGTTTGTCGTCGT TCGGGATATTGGCTTACGCTTTTTTGAGTGATGATTTTTCGGTGATTTATGTCGCCCAACATTCCAACAGCCAATTACCG GATTTCTTTAAATTTGCGGCGACTTGGGGCGGACACGAAGGCTCAATGCTGTTTTGGCTGACCGCACTGACACTATGGAC CAGCGTTTTTTGCATTTTTTCGGATAAATCTGACCGCTTGTTTAATCAGCGAACCTTGGCGGTATTAGGCTTGATTAGCC TAGGATTTATGCTGTTTATTCTTTTGGTTTCCAATCCGTTTGAGCGTAGTTTTCCGCCTCCGCCGGAGGGCAGAGATCTT AACCCGATGTTGCAAGACGTAGGGCTTATCTTCCATCCGCCTTTACTTTATTTAGGTTATGTCGGTTTTGCGGTAAGCTT TGCAATGGTTGTGGCGGCATTAATGGAAGGTATGCTGGATGCCGCAGTAGTGCGTTGGATTCGACCTTGGACAATGATCT CTTGGGGCTTTCTTACCGCAGGGATTATTCTCGGTGCATGGTGGGCGTATTATGAACTGGGCTGGGGCGGCTGGTGGTTT TGGGATCCGGTTGAAAACGCTTCGTTAATGCCGTGGCTATTGGGAACCGCATTAGTGCATAGCTTGGTTGTGAGCGAGCA GCGCGGTATTTTTAACTATTGGACGATTTTACTGGCGATTTTTGCTTTTGCATTGAGCTTACTCGGGACTTTTATCGTGC GTTCCGGCGTACTCACTTCGGTACATGCGTTTGCAGTTGATCCGGATAGAGGAATGGCACTGCTTATTCTGTTTTTCAGT TTAAGTTTTATTGCGTTAGCCTTGTTCGCTTTTAGAGTGAATTTGTGGCAGGGCGAAGTGCGTTTCCAACCGCTATCCAA AGAAACCGCTTTATTATTAGTAAACGGCTTATTGAGCGTAGCGACTTCGGTTGTCCTACTCGGGACTTTTTACCCGATGA TTTTTACGGCGATGAATTGGGGCTCGATTTCGGTCGGCGCACCTTATTTCAATAATGTTTTTGCACCGTTGGCATTATTA TTAATGACAGTAATGGGATTTGCCGTCGTATTGCGTTGGAAGCAAATTCCGTCAAAACAAATTCTGATGAAATTATGGCT GTTACCGGTAGCGGTAGGATTGAGTTTCCTATTGATTCAACAAACGATTTCGCAAACAAAGTTGTATCAATTTGGCGTCT TGCCGACGGTATTCGTCAGCCTTGCCGTTTGGATTATTCTGACGCATTTGCCTTATTCGGCGAAATTTCTGAAAATTCGA CCGCTTGCTATGCGTTTGGCGCATATCGGTTTTGCGATTTGTGTTATCGGTGCCATGATGAACAGTTATTACGGCGATGA AATCGGCGTACGTTTAAAACCGCAGCAACAGGCGGATCTTGCCGGATTTACCTTTAAATATGAAGATTATCAGGATGGGA TCGGTGCGAACTATACGTCCGAAAATGCGTTATTTAGCATAAGCAAAGCGGGAAAAACGCTTGCGACGGTAGTGGCGGAG CGCCGCTATTACGATATTCGTACCATGACGATGTCGGAAGTCGGGCTTTATCATCACGGCTTGGACGATATTTATATTGT GATGGGCGATAAATTCGGCAATTTGGAATATGCTTTCCGTTTGCATTATAAGCCTTATGTCGGCGCATTATGGCTTGGCG GTATTATTATGGTGATAGCTTCCATACTTGCCTTATTCGGTTATCGTCGAAAATCGGATCTTACAGCGGATAAATAA Protein sequence : MLPELGYFALIFAAVVAVCQVGLSLWGEITKKTNFLRYNALLNSLQTVGCLSSFGILAYAFLSDDFSVIYVAQHSNSQLP DFFKFAATWGGHEGSMLFWLTALTLWTSVFCIFSDKSDRLFNQRTLAVLGLISLGFMLFILLVSNPFERSFPPPPEGRDL NPMLQDVGLIFHPPLLYLGYVGFAVSFAMVVAALMEGMLDAAVVRWIRPWTMISWGFLTAGIILGAWWAYYELGWGGWWF WDPVENASLMPWLLGTALVHSLVVSEQRGIFNYWTILLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFS LSFIALALFAFRVNLWQGEVRFQPLSKETALLLVNGLLSVATSVVLLGTFYPMIFTAMNWGSISVGAPYFNNVFAPLALL LMTVMGFAVVLRWKQIPSKQILMKLWLLPVAVGLSFLLIQQTISQTKLYQFGVLPTVFVSLAVWIILTHLPYSAKFLKIR PLAMRLAHIGFAICVIGAMMNSYYGDEIGVRLKPQQQADLAGFTFKYEDYQDGIGANYTSENALFSISKAGKTLATVVAE RRYYDIRTMTMSEVGLYHHGLDDIYIVMGDKFGNLEYAFRLHYKPYVGALWLGGIIMVIASILALFGYRRKSDLTADK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-103 | 43 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-93 | 42 |
