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Name : APP7_1125 (APP7_1125) Accession : YP_001968919.1 Strain : Actinobacillus pleuropneumoniae AP76 Genome accession: NC_010939 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1268566 - 1270413 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAATCGTTTCCCATTATGGAAGAACCTGATGATTATTATTATCGTACTCATCGGGGGCTTATATGCTCTTCCTAA CCTATACGGAGAAGATCCGTCGGTTCAAATTTCCGGAACCCGCGGTCAGCAAGCGACGAGCGAAACGCTCGTTCAAGTAC AGGGAACGTTGTCGTCAATGAATATCACCCCGAAATCAGCCGTTCTCGAGAACGGCTCGATTTTAGTGCGTTTAGAAAAA GATGAACAACAATTACCTGCCAAAGAAAAAATTTCCGAAGTCTTAGGCGATAAATTTTCCGTAGCGTTAAACCTTGCGCC GGCAACGCCGACTTGGCTAACCGACATCGGCGGTAACCCGATGAAACGAGGCTTGGACTTACGCGGCGGCGTTCGCTTCC TGATGGAAGTGGATATGAACACCGCATTGGCTAAACAACAAGAAAATCTACAAGACAGTTTACGTACGGAACTTCGTAAA GAAAAACTGCAATATAAAGCGGTTAAAAAAGGCGAAAATTTTGCCACGGTAATTGAATTTGCCGATGAGGAAACCGCCAA TAAAGCCATTCGTTATATTCGTCGCGTTCACACTGCTCTTGAAGCCGCTTCTATTAGCCCGACAGAGATTTCATTCAGCC CGTCGGAAAGCGGACTCGCCACCTCACGCGATACGGCGATTGAACAAAACTTATCCATCTTACGTAAGCGTGTGGAAGAA CTCGGCGTGTCGGAGCCGACTATCCAGCGTCAAGGTGCGGATCGTATCGTGGTTGAATTACCGGGTGTGCAAGATACCGC GCGTGCTAAAGAACTTCTCGGTGCAACGGCAACGCTTGAATTCCGTTTAGTAAATGCGGAAGCCAGCCCGGAATCTGCAG CCAGAGGTATTGTACCGGCGGATTCCGAAATTCAATATACGCGTGACGGCAATCCCGTCGTGTTACGTCGTAAACCGTCT TTAGGCGGCGAACATATTATTGATGCGACCTCGGGCAAAGACGAACGCGGTTTACCGCAAGTAAGTATCAATCTTGATGC CGAAGGCGGTACGATGATGGCGGATATTACCAAAAGCGCGGTAGGCAAACCGATGGCGACCCTTTACAGCGAGTTTAAAG ACTCCGGTCGTAAAGACGCTAACGGTAAAGTGATTTTAGAAAAACACGAAGAAGTGATTAACGTCGCAACCATCAACTCA CGCCTTGGCAGCCAATTCCAAATTACCGGTATCGATTCGCCGGCAGAAGCGCAAAATCTTGCGGTACTGTTACGCTCGGG TGCATTGATTGCACCGATTGTGATTGTGGAAGAACGTACTATCGGCGCTTCTTTAGGTGCGGATAACGTTGCGAAAGGGA TGGAAGCCGGTATGTACGGTTTAATCTTAACCATCGCATTCTGTTTAATTTACTACAAAATGTTCGGAGTGTTTGCGGCA GCGGCTCTGACGGCAAATATGGTGCTGACTATCGGTTTAATGTCATTAATCGGTGCAACACTGACTATGCCGGGAATTGC CGGTATCGTACTGGCGGTAGGTATGTCGGTCGATGCAAACGTATTGATTTACGAACGTATTAAAGAAGAACTGCGTAACG GACGATCAATCCAACAAGCGATTCACGAAGGTTATAACGGTGCGTTCACCTCGATTTTCGACTCGAACTTAACCACGATT TTAACCTCGTTAGTGCTGTATGCGGTCGGTACTGGTCCGGTAAAAGGCTTTGCAATTACGCTTGCACTTGGGGTAATGAT TTCGATGTTTACCGCAATTACCGGTACTCGTATGCTCGTAAACTGGGTGTACGGCGGCAATAAACGTGTGAAAAAACTTT GGATTTAA Protein sequence : MLNRFPLWKNLMIIIIVLIGGLYALPNLYGEDPSVQISGTRGQQATSETLVQVQGTLSSMNITPKSAVLENGSILVRLEK DEQQLPAKEKISEVLGDKFSVALNLAPATPTWLTDIGGNPMKRGLDLRGGVRFLMEVDMNTALAKQQENLQDSLRTELRK EKLQYKAVKKGENFATVIEFADEETANKAIRYIRRVHTALEAASISPTEISFSPSESGLATSRDTAIEQNLSILRKRVEE LGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATATLEFRLVNAEASPESAARGIVPADSEIQYTRDGNPVVLRRKPS LGGEHIIDATSGKDERGLPQVSINLDAEGGTMMADITKSAVGKPMATLYSEFKDSGRKDANGKVILEKHEEVINVATINS RLGSQFQITGIDSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVAKGMEAGMYGLILTIAFCLIYYKMFGVFAA AALTANMVLTIGLMSLIGATLTMPGIAGIVLAVGMSVDANVLIYERIKEELRNGRSIQQAIHEGYNGAFTSIFDSNLTTI LTSLVLYAVGTGPVKGFAITLALGVMISMFTAITGTRMLVNWVYGGNKRVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-122 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-122 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-122 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-122 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 46 |
