Gene Information

Name : APP7_1449 (APP7_1449)
Accession : YP_001969243.1
Strain : Actinobacillus pleuropneumoniae AP76
Genome accession: NC_010939
Putative virulence/resistance : Virulence
Product : toxin RTX-I translocation ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1616239 - 1618362 bp
Length : 2124 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTTTATCGGGAAGAAGACTACGGATTATACGCACTGACGATTTTAGCCCAGTACCATAATATTGCTGTAAATCC
GGAAGAACTAAAACATAAATTCGACCTTGAAGGAAAAGGCTTAGATCTAACCGCTTGGCTATTAGCCGCAAAATCATTAG
AACTTAAAGCAAAACAAGTAAAAAAAGCGATTGATCGTTTGGCGTTTATCGCACTACCGGCACTTGTATGGCGAGAAGAC
GGTAAACATTTTATTTTGACTAAAATTGATAATGAAGCAAAAAAATATTTAATTTTTGATTTGGAAACGCATAATCCTCG
CATTTTGGAACAAGCGGAATTCGAGAGCTTATACCAAGGAAAACTGATTTTAGTTGCATCAAGAGCTTCCATCGTAGGTA
AGCTGGCAAAGTTTGACTTCACTTGGTTTATACCGGCGGTAATTAAGTATCGTAAGATTTTTATTGAAACGTTAATTGTT
TCAATTTTTTTGCAAATTTTCGCACTAATTACACCGCTTTTTTTCCAAGTCGTGATGGATAAAGTCTTGGTACACCGAGG
TTTTTCAACCTTAAATGTGATTACGGTGGCATTAGCGATCGTCGTGCTGTTTGAAATTGTGCTAAACGGTTTACGTACCT
ATATTTTTGCGCATAGTACCAGCCGTATTGATGTGGAGTTGGGAGCAAGATTATTCAGACATTTATTAGCACTCCCAATC
TCTTATTTTGAAAATCGTCGAGTCGGCGATACGGTGGCTCGTGTACGAGAACTCGATCAAATTCGTAACTTCTTAACCGG
GCAGGCACTTACTTCCGTGTTGGATTTAATGTTTTCCTTTATCTTCTTTGCAGTGATGTGGTATTACAGCCCTAAACTTA
CTCTTGTGATTTTAGGCTCGTTACCGTTTTATATGGGGTGGTCGATTTTTATCAGCCCTATTTTACGTCGCCGTTTAGAT
GAAAAATTCGCACGTGGTGCGGACAATCAGTCATTCTTAGTGGAATCGGTGACTGCAATCAATACGATTAAAGCGTTGGC
GGTTACCCCTCAAATGACTAATACCTGGGATAAGCAATTAGCCAGCTATGTATCGGCGGGATTCCGTGTAACCACATTAG
CTACTATCGGACAGCAAGGTGTACAATTTATTCAAAAAGTCGTGATGGTTATTACCTTATGGCTAGGCGCACATTTAGTG
ATTTCAGGCGATTTAAGTATCGGACAATTAATCGCATTTAATATGTTATCCGGTCAAGTGATTGCACCGGTGATTCGTTT
AGCGCAACTTTGGCAAGATTTCCAACAAGTGGGAATTTCGGTAACGCGTTTAGGTGATGTTTTAAACTCTCCGACCGAGA
GCTATCAAGGAAAATTGGCGTTACCGGAAATTAAAGGCGATATTACCTTCCGTAATATACGCTTCCGCTACAAACCGGAT
GCGCCGGTGATTTTAAATGATGTGAATTTATCGATTCAGCAAGGTGAAGTGATCGGTATCGTAGGACGTTCAGGCTCAGG
GAAGAGCACCTTAACGAAATTAATTCAACGTTTTTATATTCCGGAAAACGGTCAGGTATTAATAGATGGGCATGATTTAG
CATTGGCGGATCCGAACTGGCTACGTCGTCAAGTCGGGGTGGTATTACAAGATAACGTACTATTAAATCGTAGTATTCGA
GATAATATTGCCTTAGCGGATCCGGGTATGCCAATGGAAAAAATTGTCCATGCGGCAAAATTAGCCGGCGCACATGAATT
TATTTCTGAATTGCGTGAGGGATATAACACGATTGTTGGTGAGCAAGGTGCGGGGCTATCTGGCGGGCAACGCCAACGTA
TTGCGATTGCACGCGCTTTGGTGAATAACCCGAAAATCTTAATTTTTGATGAAGCGACCAGCGCATTAGATTATGAATCC
GAGCATATTATCATGCGCAATATGCACCAGATTTGTAAAGGGAGAACGGTAATTATCATTGCACACCGTTTATCTACGGT
AAAAAATGCCGACCGTATTATTGTGATGGAAAAAGGTCAGATTGTGGAACAAGGTAAGCATAAAGAGCTGCTTGCTGATC
CAAACGGCTTATATCACTACTTACACCAATTACAATCGGAATAG

Protein sequence :
MDFYREEDYGLYALTILAQYHNIAVNPEELKHKFDLEGKGLDLTAWLLAAKSLELKAKQVKKAIDRLAFIALPALVWRED
GKHFILTKIDNEAKKYLIFDLETHNPRILEQAEFESLYQGKLILVASRASIVGKLAKFDFTWFIPAVIKYRKIFIETLIV
SIFLQIFALITPLFFQVVMDKVLVHRGFSTLNVITVALAIVVLFEIVLNGLRTYIFAHSTSRIDVELGARLFRHLLALPI
SYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLMFSFIFFAVMWYYSPKLTLVILGSLPFYMGWSIFISPILRRRLD
EKFARGADNQSFLVESVTAINTIKALAVTPQMTNTWDKQLASYVSAGFRVTTLATIGQQGVQFIQKVVMVITLWLGAHLV
ISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTESYQGKLALPEIKGDITFRNIRFRYKPD
APVILNDVNLSIQQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIR
DNIALADPGMPMEKIVHAAKLAGAHEFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES
EHIIMRNMHQICKGRTVIIIAHRLSTVKNADRIIVMEKGQIVEQGKHKELLADPNGLYHYLHQLQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 87
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 87
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_1449 YP_001969243.1 toxin RTX-I translocation ATP-binding protein VFG0907 Protein 0.0 87
APP7_1449 YP_001969243.1 toxin RTX-I translocation ATP-binding protein VFG1557 Protein 0.0 87
APP7_1449 YP_001969243.1 toxin RTX-I translocation ATP-binding protein VFG1501 Protein 0.0 87
APP7_1449 YP_001969243.1 toxin RTX-I translocation ATP-binding protein VFG0841 Protein 0.0 73
APP7_1449 YP_001969243.1 toxin RTX-I translocation ATP-binding protein VFG1269 Protein 0.0 55