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Name : secD (Smlt2011) Accession : YP_001971825.1 Strain : Stenotrophomonas maltophilia K279a Genome accession: NC_010943 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2032754 - 2034634 bp Length : 1881 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGGCGCCGCGCGGGACCCAAGCAATGCTCGAATTTCCACGCTGGAAGTACGTCGTCATCCTGATCGTACTGGCGCTCAG CGCGCTGTACGCGCTGCCCAACATCTACCAGAAGGACCCGGCCCTCCAGATCACCGCCAACCGTGGCGGGCAGATCGACG ATGCGCTGCGCGACCGTGTGCTGGCCGACCTGAAGACGGCCGGAGTCACCCCCGTCGGTGTCGAGAAGGAAGGGGAAAGC CTGATTGTCCGCCTGCCGGACCTGAAGGCGCAGTCCGCTGCCAGCGACGCCCTGCGCGACACCGTCGGCGAAAAGTACAC CGTGGCCCTGAACCTGGCCTCGACCGTGCCGGACTGGCTGGCCAACCTCGGCGGTCGCCCGATGGTGCTGGGCCTGGACC TGCAGGGTGGTGTGCACTTCGTGCTGCAGGTCGACCAGAAGGCCGCCCTCGACAAGCGCCTGGACGCCTACACCGAAGAC GTGCGCAGCACCCTGCGTGACGCGCGCATCGCGTACCAGTCGGTGGAGCGTCGCGCGGACAACAGCATCGTGGCCAACCT GAGCCCGTCCGCCGGTGATGACGCCGCACAGCGTGCCCGTGCGGCGCTGGTGAAGGCGCAGCCGACGCTCGGCTACGACG TCAGCGGCAACCGAATCACGGTGACCGTGCCGGAGACCGAGATCGCGCAGATCGCCAATGGCGCCATCGAGCAGAACATC AACACCCTGCGCAACCGCGTGAACCAGCTCGGCGTGGCCGAGCCGATCATCCAGCGCCAGGGTGCCGACCGCGTGGTCGT GCAGCTGCCCGGCGTGCAGGACACTGCCGAAGCCAAGCGCATGATCGGCGCCACCGCCACCCTGGAATACCGCGCGGTGG TCGAGGGCAATGCCCAGGACGCCATCGACTCCGGCCGCATTCCGCCGGAAGCGAAGGTCTATCAGCGTCGTGACGGCGGC GGTCCGATCCTGCTGAACAAGCGCGTGATCGTCACCGGCGACCAGATGGTCGGCGCGCAGGCGGTGACCGACTCCACCAG CGGTGCCCCGGCGGTCAGCGTGACGCTGAACAACGTCGGCGGCCAGCGCATGTTCGACTTCACCAGCGCCAACGTGAACA AGCCGATGGCGGTGGTGTATACCGAACGCGTGCCGACCGTGACCCTGGTTGACGGCCAGGAAGTGCGTGGCTTCAAGGTC AACGAGGAAGTGATCTCGGTGGCCAACATCAACGGCGTGTTCGGCAAGAACTTCCAGACCACCGGCCTGCAGAAGAAGGA AGCCGACGACCTGGCCAAGCTGCTGAAGTCCGGCTCGCTGGCCGCGCCGATGGACTTCGTCGAAGAGCGTGTGGTCGGCC CGAGCCTCGGCGCCGAGAACGTCAAGAACGGCATGCGCGCAGTGGTGTTCGCGTTCCTGTTCACCCTGGTGTTCTTCAGC GTCTACTACCGCATGTTCGGTGTGATCACCTCGATCGCGATGCTGTTCAACCTGCTGATCGTGGTGGCGGTGATGTCGCT GTTTGGCGCGACCATGACCCTGCCGGGCTTCGCCGGCCTGGCGTTGTCGGTGGGCCTGTCGGTGGACGCCAACGTGCTGA TCAACGAGCGTATCCGTGAAGAGCTGCGTGCCGGCGTGCCGGGCAAGACCGCGATCGTGACCGGTTACGAGCGTGCCTCG GGCACCATTCTCGACGCCAACCTGACCGGCCTGATCGTCGGCGTGGCGCTGTTCGCATTCGGTACCGGTCCGCTGAAGGG CTTCGCACTGACCATGATCATCGGTATTTTCGCCTCCATGTTCACCGCGATCACCGTGTCGCGTGCGCTGGCGACGCTGA TCTACGGCCGTCGCAAGAAGCTCCAGAACGTGGCCATCTGA Protein sequence : MAPRGTQAMLEFPRWKYVVILIVLALSALYALPNIYQKDPALQITANRGGQIDDALRDRVLADLKTAGVTPVGVEKEGES LIVRLPDLKAQSAASDALRDTVGEKYTVALNLASTVPDWLANLGGRPMVLGLDLQGGVHFVLQVDQKAALDKRLDAYTED VRSTLRDARIAYQSVERRADNSIVANLSPSAGDDAAQRARAALVKAQPTLGYDVSGNRITVTVPETEIAQIANGAIEQNI NTLRNRVNQLGVAEPIIQRQGADRVVVQLPGVQDTAEAKRMIGATATLEYRAVVEGNAQDAIDSGRIPPEAKVYQRRDGG GPILLNKRVIVTGDQMVGAQAVTDSTSGAPAVSVTLNNVGGQRMFDFTSANVNKPMAVVYTERVPTVTLVDGQEVRGFKV NEEVISVANINGVFGKNFQTTGLQKKEADDLAKLLKSGSLAAPMDFVEERVVGPSLGAENVKNGMRAVVFAFLFTLVFFS VYYRMFGVITSIAMLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRAGVPGKTAIVTGYERAS GTILDANLTGLIVGVALFAFGTGPLKGFALTMIIGIFASMFTAITVSRALATLIYGRRKKLQNVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-96 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-96 | 44 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-96 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-96 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-96 | 44 |
