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Name : glcD (RHECIAT_CH0000893) Accession : YP_001977056.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit D Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 904077 - 905516 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGTCCGACGCCATTCCGTTTCTTGCGCCCCGCGCCGATGTCCTGGCCCGGCGCTCTCAAATCGTCGCCGATCTTACCGA TCTGCTGCCGCCGGAATGCCTGGTGCATGAGGCGCGCGAGCTGGTCCCCTTCGAGACCGACGCCTTCGTTTCCTATCGCC GCCTGCCGCTCGCCGTTGCCCTGCCGCGCACCACGGCCGAGGTTTCTGCCGTCATGCGTTATTGCCATCGCTATGGCGTT CCCGTCGTGCCGCGCGGCGCCGGCACATCGCTGTCCGGCGGCGCCATTCCGCAGGAGGATGCCGTCGTGCTCGGCCTGTC GAAGATGAACCGGATCCTCGAGATCGATCTGCCCAACCGCGTCGCCGTGGTGCAGGCCGGCGTGACCAATCTCAATATCT CCGAGTCGGTGTCGGCGGACGGGTTTTTCTATGCGCCCGACCCGAGTTCGCAGCTTGCCTGCACCATCGGCGGCAATATC GGCATGAATTCCGGCGGCGCCCACTGTCTGAAATACGGTGTGACAACCAACAATCTGCTCGGCGTACGGATGGTGCTGGT CGACGGCACGGTAATCGAGCTCGGCGGCAAGGCGCTGGATGCGGGCGGCTATGACCTGCTTGGCCTCGTCTGCGGCCATG AAGGCCAGCTCGGCATCGTCACCGAGGCGACGGTGCGGCTGATCGCCAAGCCCGAAGGCGCGCGCCCGGTGCTCTTCGGC TTCGAGAGCTCGGAAGAGGCCGGCGCCTGCGTCGCCGATGTCATTGCCGCCGGCATCATCCCCGTTGCGATCGAATTCAT GGACAAGCCGGCGATCGAGATCTGCGAGGCTTTCGCCCATGCCGGCTACCCCCTCGATGTCGGCGCGCTGCTGATCGTCG AGGTCGAGGGATCGGAGGCGGAAATGGACGCCATGCTGAAGGACGTGGTCGACATCGCCCGCAGGCGCGGCGTGAAGACC GTGCGCGAATGCCAGTCCGCCACCGAAGCGGCGCTGATCTGGAAGGGCCGCAAGTCCGCCTTCGGCGCCACCGGCCGCAT CGCCGATTATATCTGCATGGACGGCACCGTGCCGCTCAGCCAGCTGTCGCACGTCTTGAAGAAGACCGCCGAAATCGTCG ATCACTATGGCCTGCGCGTCGCCAACGTCTTCCATGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCAACGCCAAC GATCCCGACGATGCCGCCCGTGCCGAAGCCGCCGGCAACGATATCCTGAAGCTGTGCGTCGACGCCGGCGGCTGCCTCAC CGGCGAGCATGGCGTGGGCATCGAAAAGCGTGACCTGATGCGGCATCAATATTCGGAGGCCGACCTCGCCCAGCAGATGG CGGTGCGTGCTGCCTTCGATCCGGGCTGGCTGCTCAACCCGTCGAAGGTCTTTCCGCTCGAAGGACGCCCCGCCGCATGA Protein sequence : MSDAIPFLAPRADVLARRSQIVADLTDLLPPECLVHEARELVPFETDAFVSYRRLPLAVALPRTTAEVSAVMRYCHRYGV PVVPRGAGTSLSGGAIPQEDAVVLGLSKMNRILEIDLPNRVAVVQAGVTNLNISESVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVRMVLVDGTVIELGGKALDAGGYDLLGLVCGHEGQLGIVTEATVRLIAKPEGARPVLFG FESSEEAGACVADVIAAGIIPVAIEFMDKPAIEICEAFAHAGYPLDVGALLIVEVEGSEAEMDAMLKDVVDIARRRGVKT VRECQSATEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLKKTAEIVDHYGLRVANVFHAGDGNMHPLILFNAN DPDDAARAEAAGNDILKLCVDAGGCLTGEHGVGIEKRDLMRHQYSEADLAQQMAVRAAFDPGWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-96 | 49 |
