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Name : secD (CJA_1458) Accession : YP_001981945.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1688443 - 1690320 bp Length : 1878 bp Strand : + Note : identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 DNA sequence : ATGTTGAATCGCTACCCGCTTTGGAAGTACCTGGTGCTTCTGTTCCTGCTGTTAATCGGCACCGTTTATGCCATTCCCAA CCTCTATATTCCCGATCCTGCGGTGCAGGTTTCCGGAGACTCCAGTGCCAAGGTGATTGACCAGCCGGTACTAGAAGCGA TGGAGGCAGCCCTGAAAAAGGCTGACATCGAATATTTCGGTGCCGAAGCTGATGGTAAAACCGCGCTGGTTCGTTTACTC AACAATGATCAGCAGATGGTTGCCCGTACTGTGATTCAGCGCGCGTTGGGTGATGGTTATGTGGTAGCACTCAACAAGGC GTCCACAACACCCGGTTGGTTGCAAGCGCTGGGCGCAGAACCTATGAAACTGGGTCTGGACCTGGCAGGCGGCGTGCACT TTTTGCTTGAGGTTGACACGGCTTCGGCTGTTGCCAAGCGTCAGGAAATCAGCGCCGATGAAATGAAAGATAAACTGCGC AAGGAAAAAATCCGTTACGCCTCTGTGGATACGGATCGCGACAATCGTATTGTCGGCCGTTTCCGCAGCGCTGATACCCG AGACCAGGCGATCAATAGCCTGAGGCGCGATCACCCCAACCAATTGTTTACCCGTGTTGATAATGGTGAAAGCAACTTCT CTTTTGTGGCCAGCTTGTCGGAAACGGCGGTCAGGACCATAGAGTCAGAAGCGGTCAGCCAAAACCTGATTACCCTGCGT AACCGCGTTAATGAATTGGGGGTTTCCGAACCTATCGTTCAAAGCCAGGGACGCAGCCGTATCATTGTTCAATTGCCTGG CATTCAGGACCCGGCGGAAGCAAAACGTGTGATTGGTAAAACGGCCAACCTGGAGTTTCGCCTGGGGGCATCGCCAGATA CACCCATCACCAACCGCGAAGAATTTCCCTATAAAGATGAAATCATGCAAATGCAGCGTGGTAATGCGGTGCTTGAAAGG CAAATTATCGTCACCGGTGACCATGTAGCCAATGCCCAGAGTTCGTTTGATCCTGAAAGTAACCAACCACAAGTCAATAT TACCCTCGATGGCTTGGGGGGCGAAAAAATGCACCGTATCACCCGCAATAATGTGGGGCGTCAAATGGGCATTTTATTTA TCGAATACAAAAACCGTACAGAAATTACGCGCAATGCCCAGGGTGAAGAAGTCCATCGCAATATCCAGTATGTAGAAAAG AAAGTCATCAGTTTGGCAACTATTCAAAGTGCGTTGGGGGTGCAGTTCCGTATTACCGGTTTGGACAAACCGGGTGAGGC TTCCGAGCTGGCCTTGTTGCTGCGTGCCGGTGCACTGGCTGCACCTATGCACTTTGTGGAAGAGCGCACCATTGGTCCAT CACTGGGGGCACAAAATATTAGGAACGGTGTTGATGCCACTATCTGGGGCATGATCCTTGTTGTCATTTTTATGTTGATT GCTTATCGCGTCTTTGGAGTGTTCGCCAACCTGGCGTTAACGATGAACGTCCTGCTGATGATTGCCGTGATGTCCATGTT TGGTGCCACACTCACCTTGCCCGGTATTGCCGGTATCGTATTAAGTATCGGTATGGCGGTGGATGCCAACGTACTGATCC ACTCGCGTATTCGTGAGGAACTGAAGGGCGGTGCATCTCCCCAACAGGCCATTTATGCGGGTTATGAACGCGCCTGGATC ACCATTCTCGATGCCAACCTGACAACACTGATCGTGGGTATTATTTTGTTTGCGATAGGTACCGGTCCGGTCAAGGGTTT TGCGGTTACATTGATGATTGGTATCGCAACCTCCATGTATACCTCAGTGACCTGTAGTCGTGCACTTGCGAACCTGGTCT ATGGTTCTCGCAAAAACCTTAAGAAAATTTCGATTTAA Protein sequence : MLNRYPLWKYLVLLFLLLIGTVYAIPNLYIPDPAVQVSGDSSAKVIDQPVLEAMEAALKKADIEYFGAEADGKTALVRLL NNDQQMVARTVIQRALGDGYVVALNKASTTPGWLQALGAEPMKLGLDLAGGVHFLLEVDTASAVAKRQEISADEMKDKLR KEKIRYASVDTDRDNRIVGRFRSADTRDQAINSLRRDHPNQLFTRVDNGESNFSFVASLSETAVRTIESEAVSQNLITLR NRVNELGVSEPIVQSQGRSRIIVQLPGIQDPAEAKRVIGKTANLEFRLGASPDTPITNREEFPYKDEIMQMQRGNAVLER QIIVTGDHVANAQSSFDPESNQPQVNITLDGLGGEKMHRITRNNVGRQMGILFIEYKNRTEITRNAQGEEVHRNIQYVEK KVISLATIQSALGVQFRITGLDKPGEASELALLLRAGALAAPMHFVEERTIGPSLGAQNIRNGVDATIWGMILVVIFMLI AYRVFGVFANLALTMNVLLMIAVMSMFGATLTLPGIAGIVLSIGMAVDANVLIHSRIREELKGGASPQQAIYAGYERAWI TILDANLTTLIVGIILFAIGTGPVKGFAVTLMIGIATSMYTSVTCSRALANLVYGSRKNLKKISI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-138 | 53 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-138 | 53 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-138 | 53 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-138 | 53 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-138 | 53 |
