Gene Information

Name : CJA_1464 (CJA_1464)
Accession : YP_001981951.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : TrmH family RNA methyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 1697479 - 1698339 bp
Length : 861 bp
Strand : +
Note : identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050

DNA sequence :
ATGTCTAACGCTGCAAATGCCCCTTTTGCCAATATCCGTATTGTGCTGGTTAACACATCCCACCCCGGCAATATCGGCGG
TGCAGCACGTGCCATGAAAAATATGGGGCTGGATCGCCTGTATCTGGTGGCCCCCAAGGAGTACCCCTCGGATAAAGCCG
TATGGCGTGCCGCGGGTGCTACAGATGTGCTGGATAACGCGGTGGTGGTGGAAACCCTGGATGAGGCCATTGCGGGCTGT
TCGCTGGTGGTCGGCACCAGTGCCCGAGAGCGCCGTATTCCCTGGCCATTGCTCGATCCGCGCCAATGCGGTGAAAGTAT
CTGGGCCGAAGCCGGTGAGCATGAGGTGGCAGTAGTCTTTGGTCGTGAGGACCGCGGCCTCACCAACGAAGAACTGCACA
AATGTACTTACCATGTCCATATACCGGCCAATGCCGAATACAGTTCCCTCAACCTGGCGACGGCTGTGCAGGTGATTTGC
TATGAGATACGCATGGCTTACCTGCAGGCAGTGGAGGGTAAAAGCTTGCCCAATCACCATTGGGATATGCCGCCAGCAGA
TGCGGGGGCCTTGGAGAATTACTACCAGCACCTTGAGCAGGCGCTGGTTGATCTCGGTTTTCTCGATCCGGATAACCCTA
AGCAAACCATGACTCGCCTGCGCCGCCTGTATAACCGCGTGCGTCTGGATCAAATGGAACTGAATATCCTGCGCGGCGTG
CTGACGGCGATGCAGAATTATGTTTACTACACAGGAAAGGTCGTGTCACAGCAGGGGCTGGCGGCGGATATTGAGTCCCT
GCGCAGTGCAGCCAAGGCTCTGGATGTAGCGCCGACAGAGGTGGATATTCCCAGGGAATAG

Protein sequence :
MSNAANAPFANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAVVVETLDEAIAGC
SLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLTNEELHKCTYHVHIPANAEYSSLNLATAVQVIC
YEIRMAYLQAVEGKSLPNHHWDMPPADAGALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGV
LTAMQNYVYYTGKVVSQQGLAADIESLRSAAKALDVAPTEVDIPRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 3e-66 55