Gene Information

Name : CJA_1616 (CJA_1616)
Accession : YP_001982096.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1876705 - 1877388 bp
Length : 684 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTCTGCTCTTGCTATGGTTCAAGCCCAAGCGGTGACGAAACAGGTCAATACCCTTGAAGGTGAATTAACAATTCTGCA
TCCGATTGATTTACGTATTGACGATGGTGAATCCCTGGCGATCACCGGCGCCTCGGGCTCCGGAAAATCGACATTGCTAG
GGATTCTTGCCGGCTTGGATATTCCTTCCAGCGGTAAAGTTCATTTGGGCGGCGAGTGCCTGACCGACATGGATGAGGAG
GGACGTGCGCAGGTGCGCGCGCGCCATGTCGGTTTTATCTTCCAGTCTTTCCAATTGTTGCCCGGATTAACCGCATTGGA
GAATGTGATGTTGCCGCTGGAGTTGCGCGGCGATAAAAATGCACGCGCCCTGGCCAGTGAGTTTCTTGAGCGCGTTGGCC
TGAGTGCACGCCTCAGCCATTATCCGCAACAGCTATCCGGCGGTGAACAGCAGCGGGTTGCCATTGCCCGCGCTTTTGCC
AGCCAGCCGCGCATCCTGTTTGCGGATGAACCCACCGGAAATCTGGATAGTGCTACCGGTGCGCGTATTATCGATTTGCT
GTTTGACCTTAACCGGGCCCAGGGGACAACCCTGATCCTGATCACCCACGAAGAGCGCCTGGCGGCGCGCTGCCAGCGCC
GCGTTGAATTGGCAGCCGGGGCATTGGTATCAGGACGGGAGTAA

Protein sequence : 
MSALAMVQAQAVTKQVNTLEGELTILHPIDLRIDDGESLAITGASGSGKSTLLGILAGLDIPSSGKVHLGGECLTDMDEE
GRAQVRARHVGFIFQSFQLLPGLTALENVMLPLELRGDKNARALASEFLERVGLSARLSHYPQQLSGGEQQRVAIARAFA
SQPRILFADEPTGNLDSATGARIIDLLFDLNRAQGTTLILITHEERLAARCQRRVELAAGALVSGRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJA_1616 YP_001982096.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-33 47
CJA_1616 YP_001982096.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-40 47
CJA_1616 YP_001982096.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-33 42
CJA_1616 YP_001982096.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJA_1616 YP_001982096.1 ABC transporter ATP-binding protein VFG2059 Protein 9e-16 41