Gene Information

Name : rnhA (CJA_2049)
Accession : YP_001982514.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : RNase H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2369988 - 2370422 bp
Length : 435 bp
Strand : -
Note : identified by match to protein family HMM PF00075

DNA sequence :
TTGAAGACCGTAGAAATATTCACTGATGGTGCCTGCAAGGGTAATCCTGGTCCCGGCGGTTGGGGCGCACTGCTCCGCTA
TGGCCAGGTCGAAAAATCCCTCTATGGCGGTGAGCCTGAAACAACCAATAATCGCATGGAGCTGATGGCGGCTATAGCAG
CACTCAGTGCCTTGAAAGAACCCTGTGCCGTCGTCATTACCACTGACTCCCAATATGTGCGTAAGGGGATTACGGAATGG
ATGCCGGGTTGGAAGCGCAATGGTTGGCGCACTGCTGCTAAAGAGCCGGTAAAGAATGCTGATTTATGGCAGCGCCTGGA
TGAGCAAAACCAGCGCCACCAGGTCACCTGGAAATGGGTGAAGGGCCACAGCGGCCACCGCGAAAATGAGCTGGCCGATG
CGCTGGCCAACCGCGGTATAGACGAATTGCGCTAA

Protein sequence :
MKTVEIFTDGACKGNPGPGGWGALLRYGQVEKSLYGGEPETTNNRMELMAAIAALSALKEPCAVVITTDSQYVRKGITEW
MPGWKRNGWRTAAKEPVKNADLWQRLDEQNQRHQVTWKWVKGHSGHRENELADALANRGIDELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-40 66