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Name : ccmF (CJA_2064) Accession : YP_001982529.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2384115 - 2386133 bp Length : 2019 bp Strand : - Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGGTGCCTGATTATTCGCTGTCATTTGGCGCCCTTGTTCCGGAGTTTGGGCATTTTGCGCTGATCCTCGCCTGTTGCTT CAGCCTGCTGCTGTTTGTGGTTCCTCTTTATGGGGCTCACCGCGGTAATCTCATCCTTATGCATTCGGCCCGCGCATTTG CGTCGGCATTTTTTGTGTTTGTGGCCATTGCCTTTGTGTGCCTGAGTTACAGTTTTGTTGTCGATGATTTCTCGGTGGCT TATGTTGCCAATCATTCCAACTCCCTGTTGCCGGTGTATTACAAAATCAGCGCAGTCTGGGGGGGGCATGAGGGTTCGCT GTTGCTGTGGATCCTGATGTTGGCGGGCTGGACGCTAGCTGTTGCTTTATTCAGCCGCTCCTTGCCGCTGGATATGCAGG CGCGGGTATTGGCTATCCTCGGGTTCGTGGGTATAGGTTTCCTGTTATTTATTTTGTTGACATCCAATCCCTTTGATCGC TTGTTGCCCCTGCCGCCTGCCGATGGAAAAGACCTCAATCCCTTGTTGCAGGATATTGGTTTGATCATACATCCTCCTGT ACTTTATATGGGGTATGTTGGTTTTAGTGTTTGTTTCGCGTTTGCAATTGCCGCTTTGCTCACCGGTCGCCTGGATAGTG CTTGGGCGCGTTGGTCGCGTCCATGGGCTACTTTGGCTTGGGGGTTCCTGTCCCTGGGAATTGCCCTGGGCAGTTGGTGG GCTTACTACGAACTGGGCTGGGGTGGCTGGTGGTTTTGGGACCCGGTAGAAAATGCCTCCTTTATGCCCTGGTTGGTAGG GACTGCCTTGATTCACTCATTGGCCGTTACTGAAAAGCGTGGTTTGTTTAAAAGCTGGACAATTTTACTGGCGATTTTTA CCTTCTCCCTGAGTTTGTTGGGAACCTTCCTGGTACGTTCCGGGGTTCTGACGTCGGTCCATGCCTTTGCAAACGATCCT GAGCGCGGTGTATTTATTCTGGGTTTCTTGTTGGTCGTGGTAGGTGGTTCACTGATCCTCTATGGCTTGCGTGCCCCGGT AGTGAAAAGTGCCGTCGGTTTTGGTTGGCTATCGCGCGAAACGCTGCTGCTATCCAATAACATCCTGCTCGTGGTGGTGA TGCTGGCAGTGTTGTTAGGAACCTTGTATCCCTTGATTGCCGATGCGCTGAAGCTGGGCAAGATTTCCGTGGGTGCGCCT TTCTTCAACCTCTTCTTTATCCCCCTCATGGGGGTTCTCTGTTTTCTGATGGCGTTTGGCCCCCTGGCTAATTGGAAGAG CTCCAGTGTCGCTTATTTGAGGCAACTGCTTATAAAACCATGGATATTCAGCCTTGCGTTGGGGTTGTTATTACCTTGGC TGTATGAAGATGAATACAGTTGGGGTGCTGCGCTGGCCACGATGATTGGTTGCTGGATTAGCTTCTCTTTAATTACAGAT CTGCTGTATCGCCTGCGTCATGCTGAAAGTGCGGCAGCGGGTTTACGCAAATTGAGTTTGAGCTATTACGCTATGGTTAT TGCCCACCTGGGGGTTGCCGTGACCCTGATTGGTGTGTGCTACACCAGTATTTATAACGAGCATCGCGACCTGCGTATGG AGGTGGGGCAGAAGGTGGCTCTGGATAATTACGAGTTTGTGCTTGAGGAATTGGCTAAGGTGAATGGCCCTAATTACGTC GCGGATGAGGCGCGTATTGCGGTGTATCACAAGGGTAAGTTCCTTAAGCAAATGAAACCACAAAAACGTCGCTACCTGGC GACCAACAGTGTTATGACAGAAGTTGCCCTGGACCCGGGGTTATTCCGCGACCTGTATATCGCTATGGGGGAACCCCTGA CCGATAATGCCTGGGCGATGCGTGTTCATTTCAAACCCTTTGTGCGCTGGATTTGGTTGGGGGCCATTTTTATGGCCCTG GGGTCACTGCTGGCTGTTGCGGATAAGCGCTATCGCAAGCTAACGAAAAAGGTTGCTGTGCCTGTAGGTGCTGGAACAGG GGTTCTGGCCAATGAATAA Protein sequence : MVPDYSLSFGALVPEFGHFALILACCFSLLLFVVPLYGAHRGNLILMHSARAFASAFFVFVAIAFVCLSYSFVVDDFSVA YVANHSNSLLPVYYKISAVWGGHEGSLLLWILMLAGWTLAVALFSRSLPLDMQARVLAILGFVGIGFLLFILLTSNPFDR LLPLPPADGKDLNPLLQDIGLIIHPPVLYMGYVGFSVCFAFAIAALLTGRLDSAWARWSRPWATLAWGFLSLGIALGSWW AYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGLFKSWTILLAIFTFSLSLLGTFLVRSGVLTSVHAFANDP ERGVFILGFLLVVVGGSLILYGLRAPVVKSAVGFGWLSRETLLLSNNILLVVVMLAVLLGTLYPLIADALKLGKISVGAP FFNLFFIPLMGVLCFLMAFGPLANWKSSSVAYLRQLLIKPWIFSLALGLLLPWLYEDEYSWGAALATMIGCWISFSLITD LLYRLRHAESAAAGLRKLSLSYYAMVIAHLGVAVTLIGVCYTSIYNEHRDLRMEVGQKVALDNYEFVLEELAKVNGPNYV ADEARIAVYHKGKFLKQMKPQKRRYLATNSVMTEVALDPGLFRDLYIAMGEPLTDNAWAMRVHFKPFVRWIWLGAIFMAL GSLLAVADKRYRKLTKKVAVPVGAGTGVLANE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-123 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-116 | 56 |
