Gene Information

Name : fecI (CJA_2297)
Accession : YP_001982760.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Virulence
Product : putative fecI Specialized sigma subunits of RNA
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2635845 - 2636357 bp
Length : 513 bp
Strand : -
Note : identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937

DNA sequence :
ATGCCTACGCATCCCGACACCGGTCTTACCCGACTTTACAGCGACCACCACGGCTGGCTATATGCTTGGTTGCGAAGGCG
TATGGGCTGTTCACACAATGCCGCTGACTTGGCGCAGGATACCTACGTCCGGCTGCTCAATTCCGGCCGCTTTCCCAGCC
AGGATCAGGCGCGTCCGTACCTGCTGCAAATTGCCAAGGGGTTGGTGATTGATCGTCATCGTCGGCGCTTAATCGAACAG
GCTTATCTGGATGCGTTGGCGAGCCAACCGGAAACCCTGGCACCTTCACCGGAGGAAACGGCTTTGGTTGTTGAGGTACT
GGTGCGTATTGATAGCGCACTTGCCAGGCTTAAGCCGGTGGTACGGGAGACCTTCCTGCTTTCGCGCTTCGAGGGGCTGA
CTTACCGTGAAATTGCCCTGCGTTTGGATATTGCGGTGGCGACGGTGCGTAAATACATGCTGATGGCGATCCAGTCTTGC
ATGTCTGCCGTGACCGATAGTGAGTGCGCCTGA

Protein sequence :
MPTHPDTGLTRLYSDHHGWLYAWLRRRMGCSHNAADLAQDTYVRLLNSGRFPSQDQARPYLLQIAKGLVIDRHRRRLIEQ
AYLDALASQPETLAPSPEETALVVEVLVRIDSALARLKPVVRETFLLSRFEGLTYREIALRLDIAVATVRKYMLMAIQSC
MSAVTDSECA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_001982760.1 putative fecI Specialized sigma subunits of RNA VFG1049 Protein 2e-29 42