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Name : clpB (CJA_3194) Accession : YP_001983648.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3802986 - 3805664 bp Length : 2679 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861 DNA sequence : ATGCCGTTATCGAGGTATTCCATGCGTATCGACCGCTTGACCAACCAATTACAGATGGCCCTGTCCGATGCCCAATCCAT TGCACTGGGACAAGACCATAGCCAACTGGAACCTGTTCACCTGCTACTGGCCATGCTCGACCAAAAAGGGGCTGGCAGTG TTCGCCTGTTGCTGGCCCAGGCGGGATTTGACGTCGCCGGATTGCGCACTGCATTAAACGAGCAGTTGGAAAAACTGCCG CAAATTAAAAATCCCACCGGCGAAGTCACCATGTCGGCGGATATGGTGCGCCTGCTCAATCTGGCCGACCGCCACGCGCA AAAAGTGGGCGACAAGTTTGTTTCCAGCGATTCGGTGCTGCTGGTGGCCATGAATGAAACCCAGGGTGGAATCGGCGAGC TGCTGAAAAAACACGGCAACGCCCAGCGTTTGCAACAAGCCATTGAAAAAGTGCGCGGCGGTGACAAAGTCGAGGATGCC GACTCCGAGGGCAACCGTCAGTCCCTGGAAAAATATACCGTGGATTTAACCGCGCGCGCCGAAGCGGGCAAGCTCGATCC GGTGATTGGCCGCGATGATGAAATTCGCCGTACGATTCAAGTGTTGCAGCGCCGCAGCAAAAACAACCCGGTGCTGATCG GTGAGCCGGGCGTGGGTAAAACAGCCATTGTCGAGGGGCTGGCCCAGCGTATCGTCAACGGTGAGGTGCCTGAGGGCTTG AAAGATAAACGCCTGTTGGCTCTGGACTTGGGGGCGCTGCTCGCCGGTGCCAAATTCCGCGGTGAATTTGAAGAGCGCTT GAAGTCCGTTATTAATGAATTGGCCAAACAGGAAGGCCGCATCATTCTGTTTGTCGACGAGTTGCACACTATGGTCGGCG CCGGTAAGGCCGAGGGCGCCATGGATGCGGGCAATATGTTGAAACCGGCATTGGCGCGCGGCGAATTGCACTGCGTGGGT GCTACCACCCTCGATGAGTATCGCAAATACGTGGAAAAAGATGCAGCGCTTGAGCGCCGTTTCCAGAAGGTGCTGGTCGA TGAGCCGGGCGAGGAAGATACCATCGCCATTTTGCGCGGCTTGAAAGAGCGCTACGAAGTGCACCACGGTGTGGATATTA CCGACTCGGCCATTATTGCCGCCGCCAAGTTGTCGCAGCGCTATATCACTGACCGCCAGTTGCCCGATAAGGCCATCGAC CTGATCGATGAAGCGGCCAGCCGTATCCGCATGGAGATCGATTCCAAACCGGAGGAAATGGATCGCCTGGAGCGCCGCCT GATCCAATTGAAAATCGAGCGCGAGGCGGTGAAAAAAGACGAAGACGAGGCCAGTAAAAAGCGCCTCGCCAAAATCGACC AGGACATCGACAAAATCGAGCGCGAATATGGCGACCTCGAAGAGATCTGGCGCGCGGAAAAAGCGGCATTGCAGGGCTCC CATGAAATCAAGAGCCAACTGGAACAGGCGCGCCTCGAATTGGAGGAAAAACGCCGCAAGGGCGACCTGGCGCGCATGAG CGAATTGCAATACGGCATTATTCCGCAGCTGGAAAAACAACTGGATATGGCCAGCCAGGCGGAAATGATGGAAATGAAAT TGCTGCGCAACAAGGTCACCGACGAGGAGATTGCCGAGGTCGTTTCCAAGTGGACGGGTATTCCTGTTTCAAAAATGCTG GAAGGCGAGCGCGAAAAATTGCTGCGTATGGAAGAGGCACTGCATAAGCGGGTGATCGGCCAACACGAGGCTGTCGTGGC TGTATCCAATGCGGTGCGCCGTGCGCGTGCAGGCTTGTCTGATGCCAATCGCCCTAACGGTTCCTTCCTGTTCCTCGGCC CCACCGGTGTGGGTAAAACCGAATTGTGCAAAGCGCTGGCTGAGTTTTTATTCGATACCTCCGATGCCATGGTGCGTATC GATATGTCGGAGTTTATGGAGAAACATTCGGTGGCGCGTCTGATCGGTGCGCCGCCCGGTTATGTAGGCTATGAGGAAGG CGGTTACCTCACCGAGAGTGTGCGCCGCAAACCCTATTCCGTGGTGTTGCTCGATGAAGTAGAAAAAGCCCACCCGGATG TGTTCAACATATTGTTGCAAGTATTGGAAGATGGCCGCTTGACCGATGGCCAGGGGCGCACCGTGGATTTTCGCAATACT GTAATTGTCATGACGTCAAACCTGGGCTCGGATCGTATTCAGGAGTTGGCGGAAGATAAATCCTTTGACACGGTGAATTT CGATTTTGGTGTAACGGACAGCATGAATTCATCGCTCAATAACGAGAATCGCTACAACGCCATGAAAGACGCGGTGATGG AGGTGGTGGCGGGCCATTTCCGCCCGGAATTCATTAACCGTATTGATGAGGTTGTGGTATTCCACCCACTGGGGCGCGAA CAAATTCGCGGTATTGCCGATATCCAACTGGCACAGCTGCGCAAGCGTCTTGCCGAGCGCGACCTTGGCCTGGAGTTGGA TGCTGCTGTTATGGAGCGTCTGGCCAGTGTTGGTTTTGATCCGGTATACGGCGCGCGCCCGTTAAAGCGGGCCATCCAGC AATTGATTGAAAACCCGCTCGCCCAGGAAATCCTGGCCGGAAAATTCCCGCCTGGTGCGATCATCCATGTGCATGAACAG GGTGACAGGCTGGCGTTTGAGGCCAAGCGCTTGCAGTAG Protein sequence : MPLSRYSMRIDRLTNQLQMALSDAQSIALGQDHSQLEPVHLLLAMLDQKGAGSVRLLLAQAGFDVAGLRTALNEQLEKLP QIKNPTGEVTMSADMVRLLNLADRHAQKVGDKFVSSDSVLLVAMNETQGGIGELLKKHGNAQRLQQAIEKVRGGDKVEDA DSEGNRQSLEKYTVDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGL KDKRLLALDLGALLAGAKFRGEFEERLKSVINELAKQEGRIILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVG ATTLDEYRKYVEKDAALERRFQKVLVDEPGEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAID LIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDEDEASKKRLAKIDQDIDKIEREYGDLEEIWRAEKAALQGS HEIKSQLEQARLELEEKRRKGDLARMSELQYGIIPQLEKQLDMASQAEMMEMKLLRNKVTDEEIAEVVSKWTGIPVSKML EGEREKLLRMEEALHKRVIGQHEAVVAVSNAVRRARAGLSDANRPNGSFLFLGPTGVGKTELCKALAEFLFDTSDAMVRI DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT VIVMTSNLGSDRIQELAEDKSFDTVNFDFGVTDSMNSSLNNENRYNAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGRE QIRGIADIQLAQLRKRLAERDLGLELDAAVMERLASVGFDPVYGARPLKRAIQQLIENPLAQEILAGKFPPGAIIHVHEQ GDRLAFEAKRLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-153 | 45 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001983648.1 | chaperone ClpB | VFG2076 | Protein | 4e-102 | 42 |
