Gene Information

Name : RHECIAT_PC0000836 (RHECIAT_PC0000836)
Accession : YP_001985457.1
Strain :
Genome accession: NC_010997
Putative virulence/resistance : Virulence
Product : putative toxin secretion ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 912380 - 914554 bp
Length : 2175 bp
Strand : -
Note : ypc00501

DNA sequence :
ATGGGCAGCCTCGACCCTGGCATCGCAAATGCGGCAGCGCAACCGGTGGATTCCGGGCTGCGTGCTTTGTGCGGAATTGC
AGCCTTCTACCGGATTGCTGCCGATCCGAACCGGCTTCAGCATGAGCTTGCAATTGGCAGCGGCGTCGCTTCTGAGCTGG
ATCTTCTACGGGCGGCATCAGCGGTCGGGTTGAAGGCAAGGGCCGTCAGCGGATTGACCGAAGCGCGGATCAGAAGCCTG
CCTGTTCCTGCGATCGTGCATATGCCGGAAGGCACATTCGCAATTCTCGGTGGGCCGACCCCCTCCGGCCGGTACAGGGT
GATTGATCCCGTCACGCGCGCCGATCGTGAATTGTCGGCCGCCGAACTGCTCATCGAGTCAGGCGCCCGTGCGCTTCTCG
TGGCTCGGAAATTGGGTGGGGCAGGAACAGATCCCAGGACCTTCGGACTGAAATGGTTTCTGCCGTCCCTCTGGCGCTAC
CGCAAGCCACTTGCACATGTCCTCGTCGCCTCGCTCTTCGTTCAGATTTTTGCCCTGGTCACGCCGCTCTTCTTTCAAGT
GGTCGTCGACAAGGTTCTCACGCACAAGGGCTATTCCACCTTGTTCGTTCTGGTCGCTGGCATTGCTGCCATCATCGGCC
TCTTCGATGTCGTCTTGCAGTATCTGCGAACCTATGCACTGTCGCACACGACCAACCGTATCGACGTCGAGCTGGGACAA
CGGCTTTTCCGTCATCTGCTTCGCTTGCCGCTCGACTATTTCGAAACACGCTCGGCAGGCCAGACGGTCGCCCGTGTCCG
TGAATTGGAAACGATCCGAAACTTTTTGACGGGCCAGGGGCTTTTCGCCGCGATCGACCTGGTATTCGCCGTCGTCTTCC
TCTGCATTCTCTGGTTCTACTCGTGGAGCCTGACACTGATCGTCCTTGGATCGATCCCGCTCTACGCCCTGGTCGGACTT
CTCGTGCGGCCGCCGCTTCGCGACATGGTCAAGGAGAAGTTCAATCGGGGCGCCGTCAGCCAGCAGCTGCTCGTCGAGGC
GATCATAGGAATTCAGACCGTCAAGTCGGCGGCGGTGGAACCGGTCATGCAGGCGCAGTGGGAAGAAAAGCTCGCGGCCT
ATGTGAAAACCGCGTTCCACACCACGCTTCTCGGCGCCGGCGGGCAGAACGTCATCCAATACATCAGCAAGCTTACGACT
GCGCTGCTGTTGCTGTTCGGTGCGCGTGCCGTCATCAACGGTGAGCTCTCAGTGGGTTCGCTCGTTGCCTTCAATATGAT
CGCCGGCCAGGCGACGACGCCTGTGCTGAGGCTCTCGCAGCTCTGGCAGGATTTTCAGCAGGTTCAGATTTCAATCGACC
GCCTCGGCGATATCTTGAATACACCGATGGAGCGGACGCCGGCGACACGACTGGCGCTTCCCGCTCCAAGGGGGCTGATC
GAGTTCAAGAATGTCAGCTTCCGTTACCGTCCTGGTGGCCAGGATATCCTGAAGGGAATCAATCTGCAGATCCGCCCTGG
CGAGGTTGTCGGCATCGTCGGTGCTTCGGGCTCTGGCAAATCGACGCTGACAAAGCTCATTCAGAGGCTCTATCTTTCCA
GTGAGGGCCAGATCCTGCTCGACGGGATGGATATTTCGCAGATGGACCCGGCGTGGCTGCGCGGGCATATCGGCGTTGTT
CTGCAGGAAAACCTGCTGTTCAACCGGACGATCCACGAGAACATAGCGCTCGCCAATCCAGCCTTGCCGCGAGCCCAGGT
CTTGGCCGCTGCGCGGCTTTCCGGCGCGGACGAATTCATATCGAAGCTGCCGCAGGGCTACGACACCGTTATAGAGGAAC
GGGGTGCGAACCTGTCGGGTGGGCAGCGCCAGCGCATGGCGATTGCCAGGGCGCTCGCTACCAACCCGCCGCTTCTCATC
TTCGATGAGGCGACGAGTGCCCTCGACTATGAAAGCGAGCGCGTCGTCCAGGAAAACATGCGCCACATCGTCCAGGGCCG
GACCGTCATCATCATCGCGCACCGGCTTGCCGCGGTTAGAAACTGCCACAGGATTGTCGGCATGGCAGACGGCCGAGTTG
TCGAGATGGGAACGCACGACGAGCTTCTACAAAAGAAGGACGGTCTCTTTGCGCGGCTCTGGGCGTTACAGCACGATACG
AGGGTTCCGGCATGA

Protein sequence :
MGSLDPGIANAAAQPVDSGLRALCGIAAFYRIAADPNRLQHELAIGSGVASELDLLRAASAVGLKARAVSGLTEARIRSL
PVPAIVHMPEGTFAILGGPTPSGRYRVIDPVTRADRELSAAELLIESGARALLVARKLGGAGTDPRTFGLKWFLPSLWRY
RKPLAHVLVASLFVQIFALVTPLFFQVVVDKVLTHKGYSTLFVLVAGIAAIIGLFDVVLQYLRTYALSHTTNRIDVELGQ
RLFRHLLRLPLDYFETRSAGQTVARVRELETIRNFLTGQGLFAAIDLVFAVVFLCILWFYSWSLTLIVLGSIPLYALVGL
LVRPPLRDMVKEKFNRGAVSQQLLVEAIIGIQTVKSAAVEPVMQAQWEEKLAAYVKTAFHTTLLGAGGQNVIQYISKLTT
ALLLLFGARAVINGELSVGSLVAFNMIAGQATTPVLRLSQLWQDFQQVQISIDRLGDILNTPMERTPATRLALPAPRGLI
EFKNVSFRYRPGGQDILKGINLQIRPGEVVGIVGASGSGKSTLTKLIQRLYLSSEGQILLDGMDISQMDPAWLRGHIGVV
LQENLLFNRTIHENIALANPALPRAQVLAAARLSGADEFISKLPQGYDTVIEERGANLSGGQRQRMAIARALATNPPLLI
FDEATSALDYESERVVQENMRHIVQGRTVIIIAHRLAAVRNCHRIVGMADGRVVEMGTHDELLQKKDGLFARLWALQHDT
RVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 4e-168 49
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 5e-168 49
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 5e-168 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHECIAT_PC0000836 YP_001985457.1 putative toxin secretion ABC transporter ATP-binding protein VFG0841 Protein 3e-164 51
RHECIAT_PC0000836 YP_001985457.1 putative toxin secretion ABC transporter ATP-binding protein VFG1501 Protein 3e-168 49
RHECIAT_PC0000836 YP_001985457.1 putative toxin secretion ABC transporter ATP-binding protein VFG0907 Protein 2e-168 49
RHECIAT_PC0000836 YP_001985457.1 putative toxin secretion ABC transporter ATP-binding protein VFG1557 Protein 3e-168 49
RHECIAT_PC0000836 YP_001985457.1 putative toxin secretion ABC transporter ATP-binding protein VFG1269 Protein 3e-149 49