Gene Information

Name : LCABL_00250 (LCABL_00250)
Accession : YP_001986015.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 26201 - 26902 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATATATCGAAGTCAAACATGAATCAAAACGTTACAAAATGGGCGAAACCATCATTACAGCAAATAACGACATTAA
TTTTACGGCTGATCAAGGCAAATTAACCGTGATTCTTGGTCCCAGCGGTGCCGGTAAATCAACCTTGCTCAATATCCTCG
GTGGCATGGACTCCCCCACTGAAGGCGAGGTATGGATTGACGGCACCGATATTGCGACTTTTTCTGATCGTCAACTGACC
GCTTTTCGCCGGCATAATGTTGGCTTCGTGTTCCAGTTTTACAATCTGATTCCGAACCTGACAACAAGGGAAAATGTTGA
ACTGGCTGGCTCAATTGTCAAAGATGCCTTGGATCCGACAACCGTTTTAAAGCAAGTCGGCCTAGGTGCGCGACTAGATA
ATTTTCCGTCACAGCTGTCTGGCGGTGAGCAACAACGGGTGGCCATTGCTCGGGCGTTGGCGAAAAACCCGAAGCTGCTG
CTTTGTGATGAACCAACTGGTGCCTTGGATTATCGAACCGGCAAACAAGTCTTGCAGTTGTTACAGGATGCCAGTCGTAA
AGATCATAAAACCGTCATGATCATTACCCATAATGCAGCGATTGCCAAAATGGCTGACCGGATCATCGAAATTAATGATG
CGCAGGTTCGCAGTATTCATGATGAACCGCAGCCAACGCCTGTCGCAGACATTGAGTGGTAG

Protein sequence : 
MAYIEVKHESKRYKMGETIITANNDINFTADQGKLTVILGPSGAGKSTLLNILGGMDSPTEGEVWIDGTDIATFSDRQLT
AFRRHNVGFVFQFYNLIPNLTTRENVELAGSIVKDALDPTTVLKQVGLGARLDNFPSQLSGGEQQRVAIARALAKNPKLL
LCDEPTGALDYRTGKQVLQLLQDASRKDHKTVMIITHNAAIAKMADRIIEINDAQVRSIHDEPQPTPVADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCABL_00250 YP_001986015.1 peptide ABC transporter ATPase NC_012469.1.7685735. Protein 7e-74 63
LCABL_00250 YP_001986015.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-42 47
LCABL_00250 YP_001986015.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-37 42
LCABL_00250 YP_001986015.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-39 41