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Name : glcD (BCAL3288) Accession : YP_002232392.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Unknown Product : putative glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3602616 - 3604109 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGAACGCTCCCGTCGAACTGTCGAGCGCCGCACGCGCGCAGCGCCAGCGCGAAGTCGTGCAGGCGCTGATGGCCGTGCT GCCGACGCACTGCCTGCTGTACCGCGACGAGGACACGGCGCCGTACGAATGCGACGGCCTGTCCGCGTACCGCCGGCTGC CGCTCGCGGTCGCGCTGCCCGAGACGGAATCGCAAGTGCAGCGGATCGTGCAGATCTGCCGCCGCATGGAAGTGCCGATC GTGCCGCGCGGCGCCGGCACGAGCCTGTCGGGCGGCGCGCTGCCGATCGCGCTCGGCGTCGTGCTGTCGCTCGCGCGCTT CACGCGCATCGTCGAAGTCGACCCGTACGCGCGCACGGCGACCGTGCAGCCCGGCGTGCGCAACCTCGCGATCTCGGAAG CGGCCGCGCCGTACGGCCTGTATTACGCGCCCGATCCGTCGTCGCAGATCGCGTGCACGATCGGCGGCAACGTCGCGGAA AACTCCGGCGGCGTCCACTGCCTGAAATACGGGCTGACCGTGCACAACGTGATGCGCGTGCGCGCGGTGACGATCGACGG CGAGGTCGTCGAATTCGGCTCGCTCGCGCTCGACATGCCGGGCCTCGACCTGCTCGCGGTGATGATCGGCAGCGAAGGGA TGTTCGCGATCGTCACCGAGGTCACGGTGCGGCTGATCCCCAAGCCGCAGACCGCGCAGCTCGTGATGGCGAGCTTCGAC GACGTCGTCAAGGGCGGCGAGGCGGTGGCAGCGATCATCGCGTCGGGCATCATCCCGGCCGGGCTCGAGATGATGGACAA GCCGGCCACGCAGGCCGTCGAGGCGTTCACGCACGCGGGCTACGACCTCGACGCGAAGGCGATCCTGCTGTGCGAATCGG ACGGCACGCCGGAAGAAGTCGCCGAGGAAATCGTGCGGATGACGGCCGTGCTGCGCGAACACGGCGCGACGCGCATCCAG GTGTCGCGCAACGAACATGAACGGCTGCGCTTCTGGTCCGGCCGCAAGAACGCGTTCCCGGCCGCCGGGCGCATTTCCGC CGATTACTACTGCATGGACGGCACCGTGCCGCGCCGCGCGATCGGCCCGCTGCTCGCGCGCATCGAGCAGCTCGAAACGC GCTACGGGCTGCGCTGCATCAACGTGTTCCATGCGGGCGACGGCAACATGCATCCGCTGATCCTGTACAACGCGAACGAT CCGGACGAGCTGCACCGCGCCGAGCAGTTCGGCGCGGAAATCCTCGAATGCTGCGTGGAATTCGGCGGCAGCGTGACGGG CGAGCACGGTGTCGGCATCGAAAAACTCAATTCGATGTGCGTGCAGTTCTCGCCGCAGGAGCGCGACGCGTTCTTCGCGG TCAAGCGCGCGTTCGATCCGGCCGGGCTGCTGAACCCGGACAAGGGCATCCCGACCCGTGCGCGCTGCGCGGAATACGGT CGCCAGCACGTGCGCGGCGGGCTGCTGCCACGCCCCGACCTGCCGCGCTTCTGA Protein sequence : MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMEVPI VPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE NSGGVHCLKYGLTVHNVMRVRAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ VSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNAND PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG RQHVRGGLLPRPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-136 | 60 |
