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Name : clpB (BCAL0347) Accession : YP_002229513.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Virulence Product : putative type VI secretion system protein TssH Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 373066 - 375735 bp Length : 2670 bp Strand : + Note : - DNA sequence : ATGAGCACGCCTCTGAAGACCCTGATCACGAAACTGAACCCGCTGTGCCGCCACGCGACCGAGCGGGCGGCGAGCGCGTG CCTGGCGCGCGGCCACTACGAGGTCGATCTGGAACACCTGTTCCTCGCGTTGCTCGACGAGGCGACGGGCGACCTGCCGC TCGCGTTGCGCGCGAGCCGCGTCGATCCGCATGCGCTGCACGCCGATCTCGAACGCGAGCTCACGCGCCTGAAGACCGGC AACACGCGCACGCCGGTGTTCTCCGTGCACCTGATCGCGCTGTTCGAGCAAGCATGGCTGATCGCGTCGCTCGATTCGCA GCTCGGCCGCATCCGGTCGGGGCACCTGCTGCTCGCGCTGCTGACCGCGCCGGATCTCGCGCAGTTCGCGCAACGGATGT CGTCGCGCTTCGCGGAAATGAACGTGACGGACCTGAAGCACAAGTTCGACGAAATCATGGCCGGTTCGAGCGAAGCCGAG CCGCGCCAGACGGACGACGAGGGCAGCGACGTCGCGCCCGCCGCCGACGGCATGGCACCCGCGGCCGGCCCGTCGAAGAC GCCCGCGCTCGACACGTACACGACCAACCTCACGCAGCGCGCCCGCGACGGCAAGATCGATCCGGTGATCGGCCGCGAAG CGGAGATCCGCCAGGCGATCGACATCCTGATGCGCCGTCGCCAGAACAACCCGATCATGACCGGCGAGGCCGGCGTCGGC AAAACGGCGGTCGTCGAAGGGCTCGCGCTGCGGATCGCGGCCGACGACGTGCCGCCGCCGTTGCGCGGCGTCGCGCTGCA CGTGCTCGACATGGGGCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAGTTCGAGAACCGGCTGAAGAGCGTGATCGACG AGGTGAAGAAGAGCGCGCATCCGATCATCCTGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGCCAGGCCGGC CAGAACGACGCGGCGAACCTGCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGCGCACGATCGCCGCGACGACGTGGAGCGA ATACAAGAAGTATTTCGAGAAGGATGCGGCGCTCGCGCGGCGCTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCGC TCGCGGCCGCGATGCTGCGCGGGATGTCGGGCCTGATGGAGAAGCACTTCAACGTGCGGATCCTCGACGATGCGATCACC GAGGCCGTGCGCCTGTCGCATCGCTACATCAGCGGCCGTCAGCTGCCGGACAAGGCGATCAGCGTGCTCGACACCGCCTG CGCGAAGGTCGCGCTCGCGCACAGCGCGACACCGGCGGCGATCGACGACACCAAGAAGCGCATCGAGCGCATCGATGCGG AAATCGCGTCGCTCGAGCGCGAGGTGGCGGGCGGCGCGGCGCACGACGAGCGGCTCGGCGAGCTGCGCGGCGCGCGCGAC ACGGCGCTCGAACAACTGGCAAAGGACGAGGAACGCTACGAAGCCGAGCGCGTGATCGTCGCCGAGATCACCGAGCTGCG CGATGCGCTCGACCGCGCACGCGGCCCGTCGGAAGACGGCCAGCCGGTCGACGTGCAGGCCACCCGCGACAAGCTCGCGG AGCGCGTCGCGGCGCTGCACGCGCTGCAAGGGAGCGAGCCGATGGTGCCGCTGCAGGTCGACGGCCACGTGGTCGCCGAG ATCGTCGCCGCGTGGACCGGCATTCCGCTCGGCCGGATGGTGAAGGACGAGATCGACACCGTGCTGAACCTGCAGCCGCT GCTGAGCGCGCGCGTGATCGGCCAGGACCATGCGCTGGAGGCGATCGCGCAGCGCGTGCGCACCGCGACCGCGAACCTCG AGGATCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACGGCGCTGGCGCTG GCCGACATCCTGTACGGCGGCGAGCGCAAGATGGTCACGATCAACATGAGCGAGTACCAGGAAGCGCACAGCGTGTCGGG CCTGAAGGGCTCGCCGCCGGGCTACGTCGGGTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCGCCGCAACCCGTATT CCGTCGTGCTGCTCGACGAAGTCGAGAAGGCGCACCCCGACGTGCTCGAAATGTTCTTCCAGGTGTTCGACAAGGGCACG ATGGACGATGCGGAAGGGCGCGAGATCGACTTTCGCAACACGCTGATCATCCTGACCTCGAACGTCGGCTCGGCCGCGGT GATGCAGGCGTGCCTGAACAAGCCGGCCGAGGAACTGCCCGACCCGGACACGCTCGCCGAGACGCTGCGTCCGCAGTTGT ACAAGACCTTCAAGCCGGCGTTCCTCGGCCGGATGAAGGTCGTGCCGTACTACCCGATTTCCGACGACGTGCTGGCCGAG ATCATCGAGCTGAAGCTCGAACGCATCCGCCGCCGGATCGAAGCGAACCACAAGGCCGCGTTCGAGTGGGACGAGTCGCT CGTCGACGCGGTGCTCGCGCGCTGCACCGAGGTCGATTCGGGCGCCCGCAACGTCGACCACATCCTGAACGGCACGCTGC TGCCGGAGATCGCGGGCCACGTGCTGGGCCGGATCGCCGACGGCGCGGCCATCGCGCGCATCGCGGTGCGCGCGGACGAG GCCGGCGAATTCGCGTACACCGTCGAATGA Protein sequence : MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALHADLERELTRLKTG NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAE PRQTDDEGSDVAPAADGMAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREVAGGAAHDERLGELRGARD TALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATRDKLAERVAALHALQGSEPMVPLQVDGHVVAE IVAAWTGIPLGRMVKDEIDTVLNLQPLLSARVIGQDHALEAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALAL ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDTLAETLRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE IIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADE AGEFAYTVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-150 | 49 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-134 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-133 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002229513.1 | putative type VI secretion system protein TssH | VFG2076 | Protein | 0.0 | 53 |
| clpB | YP_002229513.1 | putative type VI secretion system protein TssH | VFG2084 | Protein | 7e-152 | 46 |
