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Name : glcD (BCAM2817) Accession : YP_002235417.1 Strain : Genome accession: NC_011001 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 3187275 - 3188774 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAGTTTCATCTACGACGAACGGATCGACGGGCCGCTGGCGACCGTCGACCGCGCCACCCTCGTCGCCGCGCTGCACGC GGCGGCGCCCGGCCTCGACGTGCTGCACGAACGCGAGGCGCTCAAGCCGTTCGAATGCGACGGGCTGGCCGCGTACCGCA CGGTGCCGCTCGCGGTCGTGCTACCCGACACGGTCGACCAGGTGCGCGCGGTGTTGCGCGTCGCGGCCGCGCACGGCGTA CCGGTCGTCGCGCGCGGCGCGGGCACCGGATTGTCGGGCGGCGCGATGCCGCTCGAAAAAGGCATCCTGCTGGTGATGGC GAAGTTCAACCGGATCCTCGACATCGACCCCGATGCCGGCATCGCGCGCGTGCAACCCGGCGTGCGCAATCTCGCGATCT CGCAGGCCGCCGCGCCGCACGGCCTCTACTACGCGCCCGATCCGTCGTCGCAGATCGCGTGCTCGATCGGCGGCAACGTC GCCGAGAACGCGGGCGGCGTCCACTGCCTGAAATACGGGCTCACGGTGCACAACATCCTGAAGGTCGAGATCCTGACGAT CGACGGCGACACGCTCACGCTCGGCGCCGACGCGCTCGATGCACCGGGCTTCGACCTGCTCGCGCTGTTCACCGGCTCCG AAGGGATGCTCGGCATCGTCACCGAGGTGACGGTGAAGCTGTTGCCGAAGCCGCCGAGCGTGAAGGTGCTGATGGCGAGC TTCGACGACGTCGCCGAGGCGGGCGCCGCGGTCGCGCGGATCATCGGCGCGGGCGTGATCCCCGGCGGCCTCGAGATGAT GGACAACCTCGCGATCCGCGCGGCCGAGGACTTCATCCACGCGGGCTATCCGGTCGACGCGCAGGCGATCCTGCTGTGCG AGCTCGACGGCGCGGCCAGCGACGTCGACGAGGATGCCGAACGCGTCGCCGCGCTGCTGCGCGACGCGGGCGCAAGCGAG ATTCGCGTCGCGCGCGACGAAGCCGAGCGCCAGCGCTTCTGGGCCGGCCGCAAGAACGCGTTCCCGGCGGTCGGCCGGAT GTCGCCCGACTACTACTGCATGGACGGCACGATCCCGCGCCGCGAGCTGCCGCGCGTGCTCGAAGGGATCGCCGCGCTGT CCGCCGAATACCGGCTGCCGGTCGCGAACGTGTTCCACGCGGGCGACGGCAACATGCACCCGCTGATCCTGTTCGATGCG AACCGGCCCGGCGAGCTCGACCGCGCGGAAGCGCTCGGCGGCAAGATCCTCGAGCTGTGCGTCGCGGCGGGCGGCAGCAT CACCGGCGAGCACGGTGTCGGGCGCGAGAAGATCAACCAGATGTGCGTGCAGTTCAACGCCGACGAAATCACGTTCTTCC ACGCGGTGAAGGCCGCATTCGACCCCCAGGGGCTGCTCAATCCCGGCAAGAACATCCCGACGCTGCACCGCTGCGCCGAA TTCGGCGCAATGCACGTCCATCACGGCAAGCTGCCGTTTCCCGAACTGGAGCGCTTCTGA Protein sequence : MSFIYDERIDGPLATVDRATLVAALHAAAPGLDVLHEREALKPFECDGLAAYRTVPLAVVLPDTVDQVRAVLRVAAAHGV PVVARGAGTGLSGGAMPLEKGILLVMAKFNRILDIDPDAGIARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNILKVEILTIDGDTLTLGADALDAPGFDLLALFTGSEGMLGIVTEVTVKLLPKPPSVKVLMAS FDDVAEAGAAVARIIGAGVIPGGLEMMDNLAIRAAEDFIHAGYPVDAQAILLCELDGAASDVDEDAERVAALLRDAGASE IRVARDEAERQRFWAGRKNAFPAVGRMSPDYYCMDGTIPRRELPRVLEGIAALSAEYRLPVANVFHAGDGNMHPLILFDA NRPGELDRAEALGGKILELCVAAGGSITGEHGVGREKINQMCVQFNADEITFFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGAMHVHHGKLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 8e-180 | 77 |
