|
Name : Rpal_1321 (Rpal_1321) Accession : YP_001990336.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1389163 - 1390656 bp Length : 1494 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1662 glycolate oxidase, subunit GlcD DNA sequence : ATGACCATTCTGATGCCGGAGCCGGATCAGTCGGTGCTGGCCCGTCGCGACGAGATCATCGCGGCCTTGCGCAAGATCGT GCCGGGCGAGGGCGTGATCTCCAGTGCCGCGGAAATGAAACCCTACGAGTCCGACGGCCTGATGGCGTATCGGCAGCCGC CGATGGTCGTCGTATTACCGAGCACGACCAAACAGGTTTCCGAGGTGCTGCGCTATTGCCACCAGAACGGCATCAAGGTG GTGCCGCGTGGCTCCGGCACCTCGCTGTCCGGCGGCGCGCTGCCGCTCGCCGACGGCGTGCTGCTCGGCCTCGGCAAGTT CAAGCGGATCCGCGAGATCGACTTCGATAATCGCGCGGTGGTGGTCGAGCCGGGCGTCACCAATCTGGCGATCAGCCAGG CGGTCGATCACGCCGGCTTCTACTACGCGCCTGATCCGTCGTCGCAGATCGCCTGTTCGATCGGCGGCAACATCGCCGAG AATTCTGGCGGCGTGCACTGCCTGAAATACGGCATGACCACCAACAACGTCCTCGGCTGCGAAATCGTGCTGATGACCGG CGAGATCCTCAAGATCGGCGGCAAGGCGGCCGAATGCGCTGGCTACGATCTGATGGGCGTGATCACCGGTTCAGAGGGGC TGCTCGGCGTCATCACCGAAGTCACCGTGCGGATCCTGCGCAAGCCGGAAACGGCGCGGGCACTGATGATCGGCTTCCAG AGCGTCGAGGCGGCCGGACAGTGTGTGGCCGACGTCATCAGCGCCGGCATCATTCCGGGAGGCATGGAGATGATGGACAA GCCGGCGATTCACGCCGCCGAAGCCTTCGTTCATGCCGGCTACCCGCTTGACGTCGAGGCGCTGCTGATTATCGAGCTCG ACGGTCCGCAAGTCGAGGTCGATGAACTGATCAGCCGTGTCGAGGCGATAGCGCTCGGCTGCGGCTCGACCACCTGCCAG ATCTCCACCAGCGAGCAGCAGCGGCTATTGTTCTGGAGCGGCCGCAAGGCGGCGTTCCCGGCGGTGGGACGAATCTCGCC GGACTATCTGTGCATGGACGGCACGATTCCGCGCAAACAGCTGCCGCTGGTGCTGCGGCGGATGAACGAGATGTCCGAGA AATACGGCCTGCGCGTCGCCAACGTATTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTGTATGACGCCAACAAG CCAGGTGAGCAGGACGCGGCCGAAGCCTTCGGGGCAGACATCCTCAAGCTGTGTGTCGAGGTCGGCGGCGTGCTGACCGG CGAGCACGGGGTCGGGATCGAGAAGCGCGATCTGATGCCGGAGATGTTCTCCGACATCGATCTCAACCAGCAACAGCGGC TGAAATGCGCGTTCGACTCCGAAGGTCTGCTCAACCCCGGCAAAGTGTTCCCGACGCTGCACCGCTGCGCCGAGCTCGGA CGTATGCATGTCCACAAAGGCCAATTGCCGTTCCCGGATATTCCGCGGTTCTGA Protein sequence : MTILMPEPDQSVLARRDEIIAALRKIVPGEGVISSAAEMKPYESDGLMAYRQPPMVVVLPSTTKQVSEVLRYCHQNGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRAVVVEPGVTNLAISQAVDHAGFYYAPDPSSQIACSIGGNIAE NSGGVHCLKYGMTTNNVLGCEIVLMTGEILKIGGKAAECAGYDLMGVITGSEGLLGVITEVTVRILRKPETARALMIGFQ SVEAAGQCVADVISAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPQVEVDELISRVEAIALGCGSTTCQ ISTSEQQRLLFWSGRKAAFPAVGRISPDYLCMDGTIPRKQLPLVLRRMNEMSEKYGLRVANVFHAGDGNLHPLILYDANK PGEQDAAEAFGADILKLCVEVGGVLTGEHGVGIEKRDLMPEMFSDIDLNQQQRLKCAFDSEGLLNPGKVFPTLHRCAELG RMHVHKGQLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-137 | 57 |
