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Name : Rpal_2132 (Rpal_2132) Accession : YP_001991129.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2300853 - 2302835 bp Length : 1983 bp Strand : + Note : TIGRFAM: cytochrome C-type biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: nha:Nham_1439 cytochrome C-type biogenesis protein CcmF DNA sequence : ATGATCGCCGAGGCCGGGCACTACGCACTGGTTCTGGCGCTGGCTCTGGCGCTGATCCAGTCCACCGTTCCGCTGCTCGG CGCCCGGCTCAATGACGGCGCGCTGATGAATGTGGCGCGCTCGACCGCGCTGGTGCAGCTGTTGTTCGCCGGCCTGTCGT TCACCGCGCTGGTGTGGCTGCACGTCACCTCCGACTTCTCGGTGGTGAACGTGTACGAGAACTCCCACTCGATGAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGGAACCACGAAGGCTCGATGCTGCTGTGGGTCGCGATCCTGGCGCTGTTCGG CGGCCTGGTCGCGGCGTTCGGCAACAATTTGCCGCTGTCGCTGCGCGCCCACGTGTTGGCTGTTCAGGGCTGGGTCGCAA CCGCGTTCTATCTGTTCATCCTGATCACCTCGAACCCGTTCGCGCGGATTGCCAATGCGCCGGCCGAGGGCCGCGATCTC AACCCGGTGCTGCAGGATATCGGTCTCGCGGTGCATCCGCCGATGCTGTACCTCGGCTATGTCGGGTTCTCGATTTCGTT CTCGTTCGCCGCCGCTGCGCTGATGGAAGGCCGGCTCGACGCCGCCTGGGCTCGCTGGGTGCGGCCGTGGACACTGGTCG CCTGGATCTTCCTCACCCTCGGCATCGCGATGGGCTCGTATTGGGCCTACTACGAACTCGGCTGGGGTGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGCTGATGCCGTGGCTCGCCGGCACCGCGCTCTTGCACTCGGCGCTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCCGGCGTGCTCACCTCGGTGCACGCCTTCGCCACCGATCCGTCGCGCGGCGTGTTCATCCTGATCATCCTGTGCGTG TTCATCGGCGGCAGCCTGACGCTGTTTGCCTGGCGGGCCTCGTCGCTGAAGCAGGGCGGCCTGTTCGCGCCGATCTCGCG CGAAGGCTCGCTGGTGCTGAACAATCTGTTCCTCACCACCGCCTGCGCCACCGTGTTCGTCGGCACGCTGTATCCGCTGG CGCTGGAAGTGCTGACCGGCGACAAGATCTCGGTCGGCGCGCCGTTCTTCAATCTCACCTTCGGCCCGCTGATGGTGCCG CTGCTGGTCGCGGTGCCGTTCGGCCCGCTGTTGGCCTGGAAGCGCGGCGATCTGGTCGGCGCCGCGCAGCGGCTGATCGC CGCCGGCGTGGTGGCGCTGCTGGCGGTCGCCTTCGTATATGCCTGGGTCCATGGCGGCGCGGTGCTGGCGCCGCTGGCGA TCGGGCTTGCGGTGTTCGTCATCATCGGCGCGCTGGTTGACATCGCCGAGCGCATTGCGCTGTTCCGCGGTCCGCTGTCG ATCTCGCTGCGCCGCGCCTCCGGCCTGCCGCGCTCGGCCTGGGGCACGATGTTCGCCCATGCGGCGCTCGGCGTGACGCT GATCGGCATCGTCTGCGAGACCACCTGGAACAGCGAGTACATCGCCGCGATGAAGCCGGGCGACAGCACCAAGCTCGCCG GCTACGAGTTCAAGTTCGAAGGCGCCAATCAGCGCCAGGGGCCGAACTATCGCGAGTTGCTGACGCAGTTCACGGTGACC GAGAACGGCCGGCTGGTCGGCGGCATGGCGCCGTCGAAGCGCAGCTTCATCACCCGCGGCTCCTCGACCACCGAGGCGGC GCTGCTGACCCGCGGCTTCAGCCAGCTCTACATCTCGCTCGGCGATCTCAACGACCAGGGCGCGGTGACGGTGCGGATCT ATCACAAGCCGATGGTGCTGCTGATCTGGTTCGGCCCGATCCTGATGGCGCTCGGCGGCCTGCTGTCGCTGTCCGATCGC CGCTTGCGGGTCGGCGCGCCGAAGCTCGCCAAGGCGCCGCGCGTGCTGCAGCCGGCCGAGTAG Protein sequence : MIAEAGHYALVLALALALIQSTVPLLGARLNDGALMNVARSTALVQLLFAGLSFTALVWLHVTSDFSVVNVYENSHSMKP LLYKITGVWGNHEGSMLLWVAILALFGGLVAAFGNNLPLSLRAHVLAVQGWVATAFYLFILITSNPFARIANAPAEGRDL NPVLQDIGLAVHPPMLYLGYVGFSISFSFAAAALMEGRLDAAWARWVRPWTLVAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHAFATDPSRGVFILIILCV FIGGSLTLFAWRASSLKQGGLFAPISREGSLVLNNLFLTTACATVFVGTLYPLALEVLTGDKISVGAPFFNLTFGPLMVP LLVAVPFGPLLAWKRGDLVGAAQRLIAAGVVALLAVAFVYAWVHGGAVLAPLAIGLAVFVIIGALVDIAERIALFRGPLS ISLRRASGLPRSAWGTMFAHAALGVTLIGIVCETTWNSEYIAAMKPGDSTKLAGYEFKFEGANQRQGPNYRELLTQFTVT ENGRLVGGMAPSKRSFITRGSSTTEAALLTRGFSQLYISLGDLNDQGAVTVRIYHKPMVLLIWFGPILMALGGLLSLSDR RLRVGAPKLAKAPRVLQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-83 | 46 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-103 | 45 |
