|
Name : tgt (Rpal_2876) Accession : YP_001991859.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 3137614 - 3138747 bp Length : 1134 bp Strand : + Note : Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : ATGACCGTGCCCAATCACTTCGAACTCATCGGGACCGACGGCGCCGCACGCACCGGTAGGCTCACCACTCCGCATGGCGT CGTCCGTACGCCGGCCTTCATGCCGGTCGGCACCGCAGGCGCGATGAAGGGCCTGCATTGGCGCGAAGTGCGCGACGCCG GCGCCGATATCGTACTCGGCAACACCTATCACCTGATGCTGCGACCCGGCGCCGAGCGGATCGCCGCGCTCGGCGGATTG CAGCGCTTCACCACCTGGAACGGTCCGATGCTCACCGACTCCGGTGGCTTCCAGGTGATGTCGCTGGCGCAGCTGCGCAA AGTCAACGAACAGGCGGTGACGTTCCGCTCGCATATCGACGGCGCGGCGATCGAATTGTCGCCGGAGCGTGCGATCGAAG TGCAGCGTCTGCTCGGCTCCGACATCGCGATGCAGCTCGACGAGTGCGTGCGGCTGCCGGCCGATCGCGCCGATATCGAG CGGGCGATGCAGTTGTCGCTGCGCTGGGCCGAGCGCTGCAAGCGCGCGTTCGAAACCGCGCCGGACGGTTACATGCTGTT CGGCATCGTGCAGGGCGGCGACGTGCCGGAGCTGCGCCACGCCTCGGCACAGGGATTGATCGACATCGGCTTCCACGGCT ATGCGATCGGCGGCCTTGCGGTCGGCGAGCCGCAGGACGTGATGCTGGCGATGATCGAGGAGGCGGCGCCGATCCTGCCC GCCGAGCGGCCGCGCTATCTGATGGGCGTAGGCACGCCGGAGGACATGCTGGAGGCGGTGGCGCGCGGCATCGACATGTT CGACTGCGTGATGCCGACCCGCAATGGCCGCCATGGCCTGGCGTTCACGCAATACGGCCCGATCAACCTGCGCAACGCCA AGCACGCCGACGATCCGCGGCCGCTCGACGAGGAGAGCGACTGGCCGTCGGCCCGCACTTACTCGCGGGCCTATCTGCAC CATCTGGTGCGGTCGAGCGAGACGCTCGGCGCGATGCTGTTGTCGGAGATCAACATCGCCTACTATCAACGGCTGATGCG CGACATCCGCGCCGCGATCGCCGCAGGTCAGTTCGAAGAGTTCAGGCTTCGTACCCGCGCCGCCTGGGAGCGGGGCGACA TCGCGCCGCGCTGA Protein sequence : MTVPNHFELIGTDGAARTGRLTTPHGVVRTPAFMPVGTAGAMKGLHWREVRDAGADIVLGNTYHLMLRPGAERIAALGGL QRFTTWNGPMLTDSGGFQVMSLAQLRKVNEQAVTFRSHIDGAAIELSPERAIEVQRLLGSDIAMQLDECVRLPADRADIE RAMQLSLRWAERCKRAFETAPDGYMLFGIVQGGDVPELRHASAQGLIDIGFHGYAIGGLAVGEPQDVMLAMIEEAAPILP AERPRYLMGVGTPEDMLEAVARGIDMFDCVMPTRNGRHGLAFTQYGPINLRNAKHADDPRPLDEESDWPSARTYSRAYLH HLVRSSETLGAMLLSEINIAYYQRLMRDIRAAIAAGQFEEFRLRTRAAWERGDIAPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 54 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 54 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 4e-86 | 54 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 4e-86 | 54 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 54 |
