Gene Information

Name : Ctha_1060 (Ctha_1060)
Accession : YP_001995971.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1256221 - 1257849 bp
Length : 1629 bp
Strand : +
Note : TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: drm:Dred_1305 acetaldehyde dehydrogenase (acetylating)

DNA sequence :
ATGGGCATTCAGCTTTCAAATGATTTGCTATCAATCCAAGAAGCTCGAGACTTGCTTCAGCAAGCCGCCGAAGCGCTTAA
GACATTCAAACATTTTTCGCAAGAAAAAGTGGACGCTATCGTGAAAGCGATGGCCGAAGCTGGCTACGAAGCTCGCGAGG
AGCTGGCCAAAATGGCCGTCGAGGAAACCGGTTTTGGAAAAGTGGAGGATAAAATTCTAAAAAATATTCTCGGCTCAAAA
ACGCTTTATGAATACATCGCCCCGATGAAAACATGCGGGATTATAGATAAGCGAGAAAATGGCAAAATTTGGGATATTGC
CACGCCGATGGGCGTTGTAGCCGCGTTGATTCCTTCGACCAATCCAACGTCGACGATGCTCTACAAATCAATTATTTCGC
TGAAATCCAGAAACGCGATTGTCGCTTCGCCACATCCGGCGGCAAAAAAATGCACCGCCCGCGCAGCGCAAATCATGCGT
GAGGCAGCCGTAAGAGCCGGCGCGCCGGAAGGCTTGATTCACTGCATGACGAACCCAACGCTGGAAGGCACAGGGGAACT
CATGAAACACAGTTTGACGGGCGTGATTTTGGCTACGGGAAGCACGCCAATGGTGAAAGCGGCGTATTCGTCAGGAAAAC
CGGCTTATGGCGTTGGGCCGGGCAACGTGCCTGCTTTTATCGAGCGCACGGCGAATGTCAAAAAAGCGGTGGCCGACATT
ATTTTCGGAAAAACATTCGATAACGGCACGATTTGCGCTTCTGAGCAAGCTGTGGTTTGCGATTTGCCGATTAAATCTCA
AGTGATTGAGGAGATGAAAAAACGCGGCGCGTATTTCTTAAATCCTGAAGAGAAAGAAACACTTTCGCGCTTTATGTTTC
CACGCGGGTTAAATGCGGCAGTGGTTGGAAAACCGGCGGCAGTTATTGCAGCGCAAGCCGGAATTACAGTGCCGGAAACT
ACAAAAGTTTTGGTGGCGGAGCTTGCCGAGGTTGGAAAAATGGCGCCACTCTCTGCTGAAAAGCTTTCGCCTGTGCTGGC
GTTTTACACCGAAGATGGTTGGGAAGCGGGTTGCCGGCGCTGCATGGAACTGCTTGATTTTGGCGGCATTGGGCATTCGC
TTTCGTTGCATTCGCAAAACGAGCATGTCATCATGCAATTTGCCATGCACAAGCCCGCGCATCGGATTTTGATTAACACG
GTTTCGTCGGTGGGCGCAGTGGGCTATACAACCGCGCTGGCGCCATCTTTGACGCTCGGCCCAGGCACCATTGGCGGCTC
TATCACAACGGAAAACGTTGGACCAATGCAGCTCTTGAATATCAAACGTGTTGCATTCGAAACCAATCCAGTCAATGATA
AGGACGGCAATCCGGTTGCTCAAGCTGCAGTCGCAAGCAAAGAAGCCACCGTTAACGCAACCGCGCAAGTGGCAACGCAA
ACGAAGCCGAGTTATAAAAAGCTTCCTGAAAGCAGCATCATGGCGGAAATCGAGGAAAGAATTCGTTTGAAAGCGGGCAA
CACGCCAGCCGGGTTTTTAGGAAAAAAAGTCACACCCGTTAAGGAAAATCAGAGCGGAAAGCTGACAAGTGAAGAGGTCG
ATGAAATTGTAAAAACCTTTCAAAAATAA

Protein sequence :
MGIQLSNDLLSIQEARDLLQQAAEALKTFKHFSQEKVDAIVKAMAEAGYEAREELAKMAVEETGFGKVEDKILKNILGSK
TLYEYIAPMKTCGIIDKRENGKIWDIATPMGVVAALIPSTNPTSTMLYKSIISLKSRNAIVASPHPAAKKCTARAAQIMR
EAAVRAGAPEGLIHCMTNPTLEGTGELMKHSLTGVILATGSTPMVKAAYSSGKPAYGVGPGNVPAFIERTANVKKAVADI
IFGKTFDNGTICASEQAVVCDLPIKSQVIEEMKKRGAYFLNPEEKETLSRFMFPRGLNAAVVGKPAAVIAAQAGITVPET
TKVLVAELAEVGKMAPLSAEKLSPVLAFYTEDGWEAGCRRCMELLDFGGIGHSLSLHSQNEHVIMQFAMHKPAHRILINT
VSSVGAVGYTTALAPSLTLGPGTIGGSITTENVGPMQLLNIKRVAFETNPVNDKDGNPVAQAAVASKEATVNATAQVATQ
TKPSYKKLPESSIMAEIEERIRLKAGNTPAGFLGKKVTPVKENQSGKLTSEEVDEIVKTFQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 1e-95 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ctha_1060 YP_001995971.1 acetaldehyde dehydrogenase VFG1595 Protein 8e-96 48