Gene Information

Name : Ctha_1877 (Ctha_1877)
Accession : YP_001996781.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2220939 - 2221214 bp
Length : 276 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: cbk:CLL_A1467 propanediol utilization protein PduA

DNA sequence : 
ATGTCAATGGATGCTCTTGGAATGATAGAAACCAAAGGACTTGTCGGCGCCATCGAAGCCGCTGATGCGATGGTTAAAGC
GGCGAACGTTGACTTGATAGGCAAAGAGACTATTGGCGGCGGTTTTGTAACGGTTATGGTTCGCGGCGATGTGGGCGCTG
TTAAAGCAGCAACCGATGCAGGGGCAGCAGCCGCTCAACGCGTTGGCGAATTAGTTTCCGTCCATGTCATTCCGCGTCCG
CATTCGGAAGTTGAAGCGATCCTTCCTAAGAAGTAA

Protein sequence : 
MSMDALGMIETKGLVGAIEAADAMVKAANVDLIGKETIGGGFVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HSEVEAILPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 66
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 66
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ctha_1877 YP_001996781.1 microcompartments protein VFG1597 Protein 9e-16 66
Ctha_1877 YP_001996781.1 microcompartments protein VFG1596 Protein 6e-16 66
Ctha_1877 YP_001996781.1 microcompartments protein VFG1598 Protein 4e-15 64