Gene Information

Name : Ppha_1173 (Ppha_1173)
Accession : YP_002018065.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1227638 - 1228621 bp
Length : 984 bp
Strand : +
Note : PFAM: transketolase; transketolase; KEGG: cch:Cag_1192 transketolase-like

DNA sequence :
ATGGAAGAAAATAACATCGGGGTTCCGGCTTCGCCATATGTTTCGCGGGGAAACAAAGCTACCCGTACCGGGTTTGGCGA
AGCTTTGCTTGAAATAGGCAGGGAGGATAGTTCTGTTGTCGCTCTGTGCGCCGATTTGACGGGCTCCCTGAATATGAATT
TATTTCGCGATGCTTTTCCCGACCGTTTTATCCAGACAGGGATCGCTGAGGCAAACATGATCTCCATGGCTGCCGGTCTT
GCGACAACAGGCAAAATACCGATTGCAGCAACGTTTGCCGTCTTTGCTACTGGCAGGGTTTACGATCAGATACGCCAGTC
GGTCTGTTATTCAAATCATAATGTAAAGATCTGCGCTTCACATGCAGGGCTGACACTGGGTGAAGATGGAGCTACCCACC
AGATTCTTGAGGATATTGGCCTTATGCGTGGTCTGCCAAGAATGACGGTAGTTGTGCCCGCCGATTACAGTGAAACCATT
CGTGCGACCAGGGCCATTGTGAAGCATCAGGGGCCAGTCTACCTTCGTTTCGGAAGGCCGAACATTCCTGATTTTTCGCT
TGACGAGGATGGCTTTGAAATCGGCAAGTCGATCGAGCTCCATCCAGGAAAAGATGTTACCGTCATTGCCTGTGGTATCA
TGGTCTGGAAAGCTCTTGAAGCTGCGCGTATACTTGAAAAAGAGGGGGTTGGCGTCAGGGTGATCAACATGCACACGATC
AAGCCAATCGATACGCTTGCTATCGTTCGCGCGGCCAATGATACCGGCGCTCTTGTTACGGCTGAAGAGCACCAGACCTT
TAACGGTCTTGGTGATGCAGTGGCCCATGTTTGTGCTCTCAATATTCCGGTACCGATTGAGATGGTCGGAGTTGAAGATC
AGTTTGGCGAGTCAGGAAAAGCTGATGAGCTTCTGGAAAAATACAGGCTGACAACCGGAGACATTCTTGAAAAAATTTAC
ATCGCTCTGCGCAGAAAGAGTTGA

Protein sequence :
MEENNIGVPASPYVSRGNKATRTGFGEALLEIGREDSSVVALCADLTGSLNMNLFRDAFPDRFIQTGIAEANMISMAAGL
ATTGKIPIAATFAVFATGRVYDQIRQSVCYSNHNVKICASHAGLTLGEDGATHQILEDIGLMRGLPRMTVVVPADYSETI
RATRAIVKHQGPVYLRFGRPNIPDFSLDEDGFEIGKSIELHPGKDVTVIACGIMVWKALEAARILEKEGVGVRVINMHTI
KPIDTLAIVRAANDTGALVTAEEHQTFNGLGDAVAHVCALNIPVPIEMVGVEDQFGESGKADELLEKYRLTTGDILEKIY
IALRRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 2e-40 44
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 2e-34 44
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 2e-41 41
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 1e-41 41