Gene Information

Name : Smal_1195 (Smal_1195)
Accession : YP_002027583.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 1355053 - 1357302 bp
Length : 2250 bp
Strand : +
Note : Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space

DNA sequence :
ATGTCCCGAGCCGTTGTCCTTTCGCCGCGCCCGCTGGCGCTTGCCGTTGCCGCCCTGCTGGCCGGCAGCGCCCTGACCGC
CCACGCTGAAGCCGACGCCACCGATATCGACACGGTGCATGTCACCGCCTCGCAGATCGCGCGCCAGGCGCTGGGCACCT
CGACCATCACCGCCGAGGACATCGCCAGGCGCCCCCCGGCCAACGACATCGCAGAGCTGCTGCGGACCATGCCCGGCGTC
AACCTGACCGGCAACAGTGCGTCGGGCCAGTATGGCAACAACCGCCAGATCGACCTGCGTGGCATGGGCCCGGAAAACAC
CCTGATCCTGGTCGATGGCAAGCGCATCGGTGCACGCGATGCGGTGCGCATGGGCCGTAGTGGCGAGCGCAATACGCGTG
GTGACACCAACTGGGTGCCGGCGGAAATGATCGAGCGCATCGAAGTGCTGCGCGGTCCGGCAGCGGCGCGCTACGGCTCC
GGTGCCTCCGGCGGCGTGGTCAACATCATCACCAAGCGCCCGACCGGTGACCTGACCGGTGCGGTCGACCTGTATGGCCT
GGTGCCCGAGCACAGCGCCGAAGGCGGCAGCGAACGCGTCGGCCTGCAGCTGAGCGGGCCGATGACCGACACCTTGTCGT
TCCGCCTGTACGGCAATCTCAACAAGACCGACGCCGATTCGCTGGCGCTCAACCGTGACTTCGCGACGAATCCGAACGCG
GTGCCGCCGGCCGGTCGCGAGGGCGTCAAGAACCGCGATGTCAACGCACTGCTGCGCTGGGACGTGACCGCCAACCAGGT
GGTTGAATTCGAAGCAGGCACCAGTCGCCAGGGCAACATCTATGCTGGCGACCGCGCGGTCAGCACCACCGGTACCTCGA
CACCGATCGATCTGGGGGCGTTGGCCGAGCAGCGGGCCGAGACCAACCGCATGTACCGCACCACCGGCGCGATCACCCAT
CGCGGCCGCTGGGGTGACGTGACCTCGCGGGTAACGGCTGCAGTGGAGGCGGTGAACAACTCGCGCATCAACGAAGGCCT
GGCCGGTGGTCCGGAAGGCAGCTTCAACGGCACCGACTGGTCGACCTCGCGCCTGCGCAACTACCAGCTGGATGGCGAAG
TGAGCTTCCCGACCACCCTGGGCGGTGCCGAGAACATCTGGACGCTGGGCTTTGAATACCTCGACAGCCGCCTGACCGAC
CCGTATTCGATGAGCCAGTCCAGCAGCAGTGGCGGCGGCTTCCCGGGGCTGTCGGCCGACCGTGCGCGCGGCAAGGCCGA
TGCGCAGACCACCGCCGTATTCGTGGAAGACAACATCTACTTGGGCGAGCGTTGGATCATCACTCCGGGCCTGCGCTTCG
ACCACCACAGCCAGTTCGGCAACAACACCAGCCCCAGCCTCAATGCGCAGTTCCGCATCAACAGCGACTGGGTGGTGAAG
GGCGGTATCGCCCGTGCATTCAAGGCGCCGAACCTGTACCAGTCGAATCCGGACTATCTGTACTACACCCGTGGCAATGG
CTGCCCGAACGCACTGCCGAGCCTGGGTGCCGGCTGCTACATGCGGGGCAATGCGGACCTGAAGGCGGAAACCAGCCTGA
ACAAGGAACTGGGCGTCGAGTGGGCACCGCAGAGCGGCTGGCAGGCGTCCTTGACGTACTTCCACAACGACTACAAGGAC
AAGATCCAGGCCGGCTACAACCAGATCGGGCTGACTGCCGACACCAAGGGCCGCATCTTCCGCTGGGAGAATGCACCCAA
GGCGATCGTGCAGGGGCTTGAAGGCAACCTAGTGATTCCGCTGCTGGGCGAGCAGGGCAACCGCCTGAAGTGGAGCAACA
ACTTCACCTACATGGTGGAGAACGAGAACAAGAGCACCGGCCAGCCGCTGTCGGTGATTCCGAAGTACACCGTCAACACG
ATGCTGGACTGGCAGGCCACCGACAAGTTGTCGCTGCTGCTGACCGGCACCTTCTACGGCAAGCAGAAGCCGGCCACCAC
CAACATCAACAATGATCCGCGCTGCACCGGCACCTGCGATCCGTCGATCGCGCTGCAGGACCGTGGTGCGTACAACATCT
GGGGCGTGAGCGCGCGCTACAAGGTGACCGAGACGGTCAGCTTCGGTTTCGGCGTCAACAACCTGGCCGACAAGCGCCTG
TTCCGCGAGGCCAACAGCAGCGATGCCGGCGCGGCCACCTACAACGAGCCGGGTCGCGCCTATTGGGCCAGCCTGCGCTT
CGGGTTCTGA

Protein sequence :
MSRAVVLSPRPLALAVAALLAGSALTAHAEADATDIDTVHVTASQIARQALGTSTITAEDIARRPPANDIAELLRTMPGV
NLTGNSASGQYGNNRQIDLRGMGPENTLILVDGKRIGARDAVRMGRSGERNTRGDTNWVPAEMIERIEVLRGPAAARYGS
GASGGVVNIITKRPTGDLTGAVDLYGLVPEHSAEGGSERVGLQLSGPMTDTLSFRLYGNLNKTDADSLALNRDFATNPNA
VPPAGREGVKNRDVNALLRWDVTANQVVEFEAGTSRQGNIYAGDRAVSTTGTSTPIDLGALAEQRAETNRMYRTTGAITH
RGRWGDVTSRVTAAVEAVNNSRINEGLAGGPEGSFNGTDWSTSRLRNYQLDGEVSFPTTLGGAENIWTLGFEYLDSRLTD
PYSMSQSSSSGGGFPGLSADRARGKADAQTTAVFVEDNIYLGERWIITPGLRFDHHSQFGNNTSPSLNAQFRINSDWVVK
GGIARAFKAPNLYQSNPDYLYYTRGNGCPNALPSLGAGCYMRGNADLKAETSLNKELGVEWAPQSGWQASLTYFHNDYKD
KIQAGYNQIGLTADTKGRIFRWENAPKAIVQGLEGNLVIPLLGEQGNRLKWSNNFTYMVENENKSTGQPLSVIPKYTVNT
MLDWQATDKLSLLLTGTFYGKQKPATTNINNDPRCTGTCDPSIALQDRGAYNIWGVSARYKVTETVSFGFGVNNLADKRL
FREANSSDAGAATYNEPGRAYWASLRFGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 3e-121 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_1195 YP_002027583.1 outer membrane receptor FepA VFG0923 Protein 1e-123 48
Smal_1195 YP_002027583.1 outer membrane receptor FepA VFG1650 Protein 2e-121 47
Smal_1195 YP_002027583.1 outer membrane receptor FepA VFG0935 Protein 3e-121 47