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Name : secD (Smal_1617) Accession : YP_002028005.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1817717 - 1819573 bp Length : 1857 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTCGAATTTCCACGCTGGAAGTACGTCGTCATCCTGATCGTACTGGCGCTCAGCGCGCTGTACGCGCTGCCCAACAT CTACCAGAAGGACCCGGCCATCCAGATCACCGCCAACCGTGGCGGGCAGATCGACGATGCGCTGCGTGACCGTGTGCTGG CCGACCTGAAGAAGGCCGGCGTGGACGCCGTTGGTGCCGAGAAGGAAGGGGAGAGCCTGATTGTCCGCCTGCCGGACCTG AAGGCGCAGTCCGCTGCCAGCGACGCCCTGCGTGACACCGTCGGTGAGAACTACACCGTGGCCCTGAACCTGGCCTCGAC CGTGCCGGACTGGCTGGCCAACCTCGGCGGTCGCCCCATGGTGCTGGGCCTGGACCTGCAGGGTGGCGTGCACTTCGTGC TGCAGGTCGACCAGAAGGCCGCCCTGGACAAGCGTCTGGATGCCTACACCGAAGACGTGCGCAGCACCCTGCGTGATGCG CGCATCCCGTACCAGTCGGTGGAACGCCGCGCTGACAACAGCATCGTGGCCAACCTGAGCCCGTCCGCTGGTGACGATGC CGCGCAGCGCGCCCGTGCCGCCCTGGTCAAGGCGCAGCCGACCCTCGGCTACGACGTCAGTGGCAACCGCATCACGGTGA CCGTGCCGGAAACCGAGATCACCCAGATCGCCAACGGTGCCATCGAACAGAACATCAACACCCTGCGCAACCGTGTGAAC CAGCTCGGCGTGGCCGAGCCGATCATCCAGCGCCAGGGTGCCGACCGCGTGGTCGTGCAGCTGCCGGGCGTGCAGGACAC CGCCGAAGCCAAGCGCATGATCGGCGCCACCGCCACCCTGGAGTACCGTGCGGTGGTCGAGGGCAATGCGCAGGACGCCA TCACCGCCGGCCGCATCCCGCCGGAAGCGAAGGTCTACCAGCAGCGTGATGGCCGCGGCCCGATCCTGCTGAACAAGCGC GTGATCGTCACCGGTGACCAGATGGTCGGCGCGCAGGCGGTAACCGATTCGAACAGTGGCTCACCGGCGGTCAGCGTGAC GCTGAACAATGTCGGCGGCCAGCGCATGTTCGACTTCACCAGTGCCAACGTGAACAAGCCGATGGCGGTGGTCTACACCG AGCGCGTGCCGACCGTGACCGTCGTTGACGGCCAGGAAGTGCGTGGCTTCAAGGTCAACGAGGAAGTGATCTCGGTGGCC AACATCAATGGCGTGTTCGGCAAGAACTTCCAGACCACCGGACTGCAGAAGAAGGAAGCCGAGGACCTGGCCAAGCTGCT GAAGTCCGGCTCGCTGGCCGCGCCGATGGACTTCGTCGAAGAGCGCGTGGTCGGCCCGAGCCTGGGTGCCGAGAACGTCA AGAACGGTATGCGCGCGGTCGTGTTCGCGTTCCTGTTCACCCTGGTGTTCTTCAGCGTCTACTACCGCATGTTCGGCGTG ATCACCTCGATCGCGATGCTGTTCAACCTGCTGATCGTGGTGGCGGTGATGTCGCTGTTCGGCGCGACCATGACCCTGCC GGGCTTCGCCGGCCTGGCGTTGTCGGTCGGCCTGTCGGTGGACGCCAACGTGCTGATCAACGAACGTATCCGTGAAGAAC TGCGTGCCGGCGTGCCGGGCAAGACCGCGATCGTGACCGGTTACGAACGTGCTTCGGGCACCATCCTCGACGCCAACCTG ACCGGCCTGATCGTCGGTGTGGCGCTGTTCGCATTCGGTACCGGTCCGCTGAAGGGCTTCGCGCTGACCATGATCATCGG TATTTTCGCCTCCATGTTCACCGCGATCACCGTGTCGCGTGCACTGGCGACGCTGATCTACGGCCGCCGCAAGAAGCTCC AGAACGTGGCCATCTGA Protein sequence : MLEFPRWKYVVILIVLALSALYALPNIYQKDPAIQITANRGGQIDDALRDRVLADLKKAGVDAVGAEKEGESLIVRLPDL KAQSAASDALRDTVGENYTVALNLASTVPDWLANLGGRPMVLGLDLQGGVHFVLQVDQKAALDKRLDAYTEDVRSTLRDA RIPYQSVERRADNSIVANLSPSAGDDAAQRARAALVKAQPTLGYDVSGNRITVTVPETEITQIANGAIEQNINTLRNRVN QLGVAEPIIQRQGADRVVVQLPGVQDTAEAKRMIGATATLEYRAVVEGNAQDAITAGRIPPEAKVYQQRDGRGPILLNKR VIVTGDQMVGAQAVTDSNSGSPAVSVTLNNVGGQRMFDFTSANVNKPMAVVYTERVPTVTVVDGQEVRGFKVNEEVISVA NINGVFGKNFQTTGLQKKEAEDLAKLLKSGSLAAPMDFVEERVVGPSLGAENVKNGMRAVVFAFLFTLVFFSVYYRMFGV ITSIAMLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRAGVPGKTAIVTGYERASGTILDANL TGLIVGVALFAFGTGPLKGFALTMIIGIFASMFTAITVSRALATLIYGRRKKLQNVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-97 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-97 | 44 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-97 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-97 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-97 | 44 |
