Gene Information

Name : Smal_2308 (Smal_2308)
Accession : YP_002028694.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 2593295 - 2595376 bp
Length : 2082 bp
Strand : +
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reu:Reut_B4646 TonB-dependent siderophore receptor

DNA sequence :
ATGCCCATCCACGCCCCGCAAACGGCCCGCCTGCCGCTGGCCGCCGCCCTCGCCCTGTGCCTGCTTCCGGCTGCCAACAC
CTTCGCCCAGGACGGTGCCACCACGCTGGACAGCATCCAGGTTTCCGGCAGCTGGCTGGGCACCGGCCTGCATGACAGCG
TCAAGAGCTTCGCCGGCGCGCGCACGGTGGTCGACCGCCAGCGCATCGAGGCCAGCGGCGCGGCCAGCATCGGCGATGCC
ATGCGCCGCATCCCCGGCGTGCAGGTCACCGACAACTCCGGCACCGCCGGCAGCTCGGTCTCGCTGAACATCGGCGTGCG
CGGCCTGACCGGGCGCTACTCGCCGCGCTCGACCGTACTGCTGGATGGTGTACCGCTGGCGGTGGCGCCGTATGGCCAGC
CGCAGCTGTCGTTCGCACCGACCAGCCTGTCCAACATCGAGTCGATCGACGTGGTGCGTGGCGGCGGCGCGGTGCGCTAC
GGGCCGCAGAACGTGGGCGGCATCATCAACTTCAGCACCCGCGCCATTCCCACCGAGGCCGGCCTGCACAGCGAAGCGGG
CGTGCGCTACACCGCCTACGACCATGGCGGCGGTGACAGCACCCAGTACAACGCCTTCCTCGGCGGCACCGGCGACAACG
GCCTGGGCGCGGCCCTGCTGTACTCCGGCCAGGATGGCCGCGGCTGGCGCCAGGGCAGCGATGACCGTTTCAACGACCTC
GCGCTGAAGTTCGCCTATGCCATCGACGAACAGCAGGAACTGCGCGCCAAGCTGTCCTACTACGATGTGCGCTCGCTGAC
GCCGGGCGGCCTGACCCGCGCCCAGTACGAGGCCGACCCGTTCCAGAACACGCGCCCCACCGATTTCTGGAAAGGCCACC
GCACCGGCATCGACCTGGGTTACACCAACACGCTGTCGGCCAACAGCGAGTTCGAGGTAGTGGCCTATTACAACGAAAGC
AGCCGTGCCAGCTCGCTGATCAACGCCGCCAATACCCAGCTGACCGTGCAGCCGCGCGACTACCGTGTGCTCGGCATCGA
GCCGCGCTACACCCAGCGCCTGCACTGGGGCGCCAGCGTGCACGACATCACCGCCGGCTACCGCTTCCTGCGCGAGCGCG
GCAACGACCGCAGCTACACCGTCACCCGCCGTACCGGTGTGGCCAGCGCCACCAACCGCTTCGACAACGCCACCGACGCA
CATGCCTTCTACATTGACGACCGCATCGCGATCGGCCAGTGGCGGATCACCCCGGGCGTGCGCATGGAGTGGATCGACAT
GGACCGCCGCCAGTCCGGAGGCGCGGCGACCGTCAGCAGCCGCAACGACAAGGCGCTGCCCTCGCTCAACATCGCCTACC
TGCTGACCCCGCAGCTGACCGTGTTCGGCAACTACACCACCTCGTTCGGGCCGGTGCAGAACATCCAGCTGAATTCGCAG
ACCGCCAGCAACCCGCTGAATCCGGAAATCGCCAGGACCACCGAGCTGGGCGCGCGCTGGCAGGACGGCGCACTGCGCGC
GGAAGTGACCGTGTTCAAGATGCGCTTCGACAACCAGATCCTGCAGGTGCCGGGGATCACCCCGCCGACCTTCCAGAACA
TCGGTGCCACCGACCACAAGGGCGTGGAAAGCGCGCTGGAGTACCACTTCGCCGAGGACAGCGCACTGGCCGGGCTGGAG
CTGTATGCCAACTACACCTGGACCAAGGCGATCCAGCAGTCCGGTGATAACCGCGGCCTGGACGTGCCCTTCTACTCGCG
CGACACCGACAGCGTCGGCGCCCGCTACGCGCTGGCCGGATGGACCTTCAACGTCTCCAGCACCCACCAGAGCGGCCAGT
ACTCCGACGCCGCCAACACCTGGGCCGAGAGCGCCGATGCGCGCGTGGGCCGCGTGCCCGGCGTGCGGCTGTGGAATGCA
CAGGTGGCCTGGCAGGTACCGGGACTGGGCGACAGCGAGATCGCGCTGGGCGTGAACAACCTGGCCGACAAGCGCTGGTA
CACCCGCAACGTCGATGGCAACGCCGGCCGCATGGTGGCCGCGCCACGCACCTTCTACCTGCAGGGCCGCTACCGCTTCT
GA

Protein sequence :
MPIHAPQTARLPLAAALALCLLPAANTFAQDGATTLDSIQVSGSWLGTGLHDSVKSFAGARTVVDRQRIEASGAASIGDA
MRRIPGVQVTDNSGTAGSSVSLNIGVRGLTGRYSPRSTVLLDGVPLAVAPYGQPQLSFAPTSLSNIESIDVVRGGGAVRY
GPQNVGGIINFSTRAIPTEAGLHSEAGVRYTAYDHGGGDSTQYNAFLGGTGDNGLGAALLYSGQDGRGWRQGSDDRFNDL
ALKFAYAIDEQQELRAKLSYYDVRSLTPGGLTRAQYEADPFQNTRPTDFWKGHRTGIDLGYTNTLSANSEFEVVAYYNES
SRASSLINAANTQLTVQPRDYRVLGIEPRYTQRLHWGASVHDITAGYRFLRERGNDRSYTVTRRTGVASATNRFDNATDA
HAFYIDDRIAIGQWRITPGVRMEWIDMDRRQSGGAATVSSRNDKALPSLNIAYLLTPQLTVFGNYTTSFGPVQNIQLNSQ
TASNPLNPEIARTTELGARWQDGALRAEVTVFKMRFDNQILQVPGITPPTFQNIGATDHKGVESALEYHFAEDSALAGLE
LYANYTWTKAIQQSGDNRGLDVPFYSRDTDSVGARYALAGWTFNVSSTHQSGQYSDAANTWAESADARVGRVPGVRLWNA
QVAWQVPGLGDSEIALGVNNLADKRWYTRNVDGNAGRMVAAPRTFYLQGRYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 2e-114 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_2308 YP_002028694.1 TonB-dependent siderophore receptor VFG1047 Protein 1e-114 42