|
Name : Smal_2704 (Smal_2704) Accession : YP_002029087.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3015903 - 3017822 bp Length : 1920 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: xcb:XC_1893 C-type cytochrome biogenesis membrane protein DNA sequence : GTGCTGCCCGAACTGGGTCAGATCCTGCTGTTGTGCGCGCTGCTGGCCTCGCTGCTGCAGGCCGGGCTGCCGCTGGCCGG CGCGCAGCGCAACGACACGGCATGGATGGCGGTGGCGCGACCGGCCGCGTTCGCACAGCTGCTGCTGCTTGCCGGTGCCT TCGCGGTGCTCACCGCCGCGTTCGTGCAGCAGGATTTCTCGGTGCGCTACGTGGCCGAGAACTCCAATTCGCTGCTGCCG ATGATCTACCGCTATTCGGCGGTCTGGGGCGCGCACGAGGGCTCGCTGCTGATGTGGGCGCTGGTGCTGGCGCTGTGGAC CGGTGCGGTGGCGCTGTTCTCGCGGCACCTGCCGGCACCGGTACAAGCGCGCGTACTGGCGGTGATGGGCGTGGTCAGCG TTGGCTTCCTCGCCTTCCTGATCTTCACCTCCAATCCGTTCCTGCGCCTGAACCCGGCGCCGCTGGAGGGTCGTGACCTC AACCCGCTGCTGCAGGACCCCGGGCTGATCATCCACCCGCCGATGCTCTACATCGGTTACGTCGGCTTCGCGGTGCCGTT CGCGTTCGCGGTGGCCGCACTGCTGGAAGGACGCGTCGACGCCCGCTGGCTGCGCTGGACGCGGCCTTGGACCAACGTCG CCTGGGGTTTCCTGACCCTGGGGATCGCGCTGGGCAGCTGGTGGGCTTACTACGAGCTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTGGAGAATGCGAGCTTCATGCCGTGGCTGGTCGGTGCGGCGCTGATCCACTCGCAGGCCGTCACCGAGAA GCGCGGTACCTTCGGCAGCTGGACGTTGCTGCTGGCAATCGCCGCCTTCGCGCTGTCACTGCTGGGTACGTTCCTGGTGC GCTCCGGGGTACTCACCAGCGTGCATTCGTTCGCTGCCGATCCTTCGCGCGGCCTGTTCATCCTGGTGTTCCTGTCGGTG CTGGTCGGCGGCAGCCTGCTGCTGTATGCACTGCGCGCGCCACGTCTGTCGGTGAACGCCGACGATCCGCGCCGTGGCTT CATCGCGACATCGCGCGAAACCCTGCTGCTGGCCAACAACCTGCTGCTGGCCACTGCCTGCGCCATGGTCCTGCTCGGCA CACTGTACCCGCTGCTGGCCGATGCGCTGTCGCTGGGCAAGATCTCGGTCGGCCCGCCCTACTTCGGCAGCCTGTTCCTG TTGCTGATGGCGCCGATGATCCTGCTGCTGCCGTTCGGCCCGCTGGTGAAGTGGCAGCGCGACCAGCCTTCGCGTGCATT CGCGTTGCTGGCACCGTGGCTGGGGCTGGCCATGTTGCTCGGCGCGCTGGCCTGGTGGCAGGCACCGCAGAATGGCTGGA AGGCTGGCCTGGGCGTCGCTGCAGCGGCCTGGGTCGGGTTGGGCACCGCCCGCTTCGTCTGGCAGCGCCTGCGCGGCAAC GGCCGCTTCACCGCCGAAATGCTTGGCATGATCGTCGCCCATGCCGGCATTGCCGTGTTCCTGGCCGGTGCGCTGCTGGT GGAAGCACTCAACGTGCAGCGCGAAGTAGCGCTGGCACCCGGGCAACAGGTGGTGGTCGGCCGCCATGAAGTGCGCTTCG AAGGCGTGGACCATCGCGAAGGTCCGAATTTCATCGCCGACCGCGGCCATCTGCGCGTGTTCCGCAACGGCCGCGAACTG GCCCTGCTGCATCCGGAGAAGCGCCAGTACGCCAGTGGCGGCCAGGTGATGACCGAGGCCGGCATCGATGCACGCTTCGA CGGCGATGTCTACGTGGCATTGGGCGAGCCGCTGGGCAACAATGCATGGGCGGTACGGGTCCACATCAAGCCGTTCGTGC GCTGGATCTGGCTGGGCGCGCTGCTGATGGCCCTGGGCGGATTCATCACCGCCGCCGACCGCCGCTTCCGTCGTCCGTAG Protein sequence : MLPELGQILLLCALLASLLQAGLPLAGAQRNDTAWMAVARPAAFAQLLLLAGAFAVLTAAFVQQDFSVRYVAENSNSLLP MIYRYSAVWGAHEGSLLMWALVLALWTGAVALFSRHLPAPVQARVLAVMGVVSVGFLAFLIFTSNPFLRLNPAPLEGRDL NPLLQDPGLIIHPPMLYIGYVGFAVPFAFAVAALLEGRVDARWLRWTRPWTNVAWGFLTLGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGAALIHSQAVTEKRGTFGSWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLSV LVGGSLLLYALRAPRLSVNADDPRRGFIATSRETLLLANNLLLATACAMVLLGTLYPLLADALSLGKISVGPPYFGSLFL LLMAPMILLLPFGPLVKWQRDQPSRAFALLAPWLGLAMLLGALAWWQAPQNGWKAGLGVAAAAWVGLGTARFVWQRLRGN GRFTAEMLGMIVAHAGIAVFLAGALLVEALNVQREVALAPGQQVVVGRHEVRFEGVDHREGPNFIADRGHLRVFRNGREL ALLHPEKRQYASGGQVMTEAGIDARFDGDVYVALGEPLGNNAWAVRVHIKPFVRWIWLGALLMALGGFITAADRRFRRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-109 | 55 |
