Gene Information

Name : Smal_0471 (Smal_0471)
Accession : YP_002026859.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2205
EC number : -
Position : 550566 - 552035 bp
Length : 1470 bp
Strand : +
Note : PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bac:BamMC406_5549 integral membrane sensor signal transduction histidine kinase

DNA sequence :
ATGATCAAGCCCAATCTGTGGCAGAAGCTGGCGGCGGTGATCGCCGCGCTGATGCTGATGTGCTGCATGGCGCTGCTGGC
ACTGCAGATGCGCGCCAACACCCGCCATGAGCAGGAAGTGGTGCAGCGGCTGTCGCTGGGCCTGGCCGAACACATCGCCC
AACGCAGCGAACTGATGGACACCAGCGGCATGCGCGATGCTGCGGTGCGTGCGCTGTTCGGCCAGCTGATGGCGGTCAAT
CCCAGCGTCGAGGTCTACCTGCTGGACGACCAGGGCCGCATTCTCGGCCACGACGCGCCCAGCGGTCATCTGGTGCGCAA
CAAGGTGGACGTGGCACCGCTACGCCGCCTGCTGTCGGGTGCGCCACTGCCGATCCTCGGCGATGACCCGCGCAGCGCCG
ATGGCCGCAAGGTGTTCAGTGCCGCACCGTTGATCGTGCAGGGGCGCCAGGCCGGTTACGTGTACGTGGTGCTGGTCGGT
GAACACCGGCAGATGCTGGCCGACGACCTGGCGGCGGGCAGCCAGTGGAACACCACATGGTGGTCGGTGATGCTGGTCGG
AAGCCTCGGCCTGCTGGCCGGGCTGGTGGCGTTCTACTGGGTGACCCGTCCGCTGCGGCGGCTGACCCGGCGCATCCAGG
CCTTCGATATCGATGCGCCGACACCGTTGCCGCCGCCCGAACCGCTGCGCCCGGGCGAGCGCGACGAGCTGGTGATTCTC
GAACATGCACATGCGCAGATGGCGCAGCGGCTGGGTGAGCAGTGGCAGCAACTGCGCCAGCAGGACCTGCAGCGGCGCGA
GCTGGTCGCCAACATCTCGCACGACCTGCGTACGCCGTTGTCGTCGCTGCATGGCTATCTGGAAACGCTGGCGCTGAAGG
ACGTCACGCTGTCACCGGACGAGCGCCGCCGCTACCTCGGTATCGCGCTGGCACAGAGCGCCAAGGTTGGCCGGCTGGCG
CGCGCGCTGTTCGAGCTGGCGCGGCTGGAGCACGGTGAAGTGCGTCTGGAGTGGGAAGTGTTCGCGCTGCCGGAACTGCT
GCAGGACGTACTGCAGAAGTTCGAGCTGGCCGCGCAGGCGCGCAACCAGCGCCTGCACGCCGAGTTCCCGCCGGGCCTGC
CGCTGGTACGTGCCGACCTGGGCCTGGTCGAGCGGGTGCTGACCAACCTGCTCGACAATGCATTGCGGCACGCGCCGGAA
GGTGGGCGGATCGAAGTGTGCCTGCGTGCGACCGCGGACAGCATCGAGGTGAGCGTGGCCGATGATGGTCCCGGCGTGGC
AGCGGCGCTGCGCGCACAGTTGTTCCAGGCGCCGGCCGCACTGGGCGCACGGCGTGGCGAGAACGGTGGCCTCGGCCTGT
TGATCGTGCAGCGTATCGTGCAGCTGCATGGCCGCCGCATCGAACTGCGCGACAGTGAGCGTGGCGCGCTGTTCGTGTTT
GCCTTGCCGCGCGCGGAGCCGGCGGCCTAG

Protein sequence :
MIKPNLWQKLAAVIAALMLMCCMALLALQMRANTRHEQEVVQRLSLGLAEHIAQRSELMDTSGMRDAAVRALFGQLMAVN
PSVEVYLLDDQGRILGHDAPSGHLVRNKVDVAPLRRLLSGAPLPILGDDPRSADGRKVFSAAPLIVQGRQAGYVYVVLVG
EHRQMLADDLAAGSQWNTTWWSVMLVGSLGLLAGLVAFYWVTRPLRRLTRRIQAFDIDAPTPLPPPEPLRPGERDELVIL
EHAHAQMAQRLGEQWQQLRQQDLQRRELVANISHDLRTPLSSLHGYLETLALKDVTLSPDERRRYLGIALAQSAKVGRLA
RALFELARLEHGEVRLEWEVFALPELLQDVLQKFELAAQARNQRLHAEFPPGLPLVRADLGLVERVLTNLLDNALRHAPE
GGRIEVCLRATADSIEVSVADDGPGVAAALRAQLFQAPAALGARRGENGGLGLLIVQRIVQLHGRRIELRDSERGALFVF
ALPRAEPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-71 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0471 YP_002026859.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 2e-71 45