|
Name : SNSL254_A1186 (SNSL254_A1186) Accession : YP_002040346.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : chaperone protein SigE Function : - COG functional category : - COG ID : - EC number : - Position : 1180209 - 1180550 bp Length : 342 bp Strand : - Note : identified by match to protein family HMM PF07824 DNA sequence : ATGGAAAGTCTATTAAATCGTTTATATGACGCGTTAGGCCTGGATGCGCCAGAAGATGAGCCACTGCTTATCATTGATGA TGGGATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACATCC TGACTTTGCAGCATTTTTTACGTCTGAACTACACCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG GCGCTTTATCGCTTGCCGCAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCAAACGTGAAGCA ATTGAAAGAGCATTATGCATAA Protein sequence : MESLLNRLYDALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDILTLQHFLRLNYTSAVTIGADADNTALV ALYRLPQTSTEEEALTGFELFISNVKQLKEHYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipC | YP_216029.1 | hypothetical protein | Virulence | SPI-5 | Protein | 2e-47 | 100 |
| pipC | NP_460063.1 | pathogenicity island-encoded protein C | Virulence | SPI-5 | Protein | 2e-47 | 100 |
| sigE | NP_455587.1 | cell invasion protein | Virulence | SPI-5 | Protein | 7e-47 | 99 |
| pipC | AAC33724.1 | PipC | Virulence | SPI-5 | Protein | 3e-47 | 99 |
| sigE | AAS66828.1 | SigE | Not tested | SSR-1 | Protein | 2e-20 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A1186 | YP_002040346.1 | chaperone protein SigE | VFG0591 | Protein | 5e-48 | 100 |
