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Name : cobT (SNSL254_A2192) Accession : YP_002041283.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 2105978 - 2107048 bp Length : 1071 bp Strand : - Note : 'catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole' DNA sequence : ATGCAGACACTACACGCTTTACTCCGTGACATTCCTGCGCCGGACGCCGAGGCGATGGCGCGTGCGCAGCAACATATTGA CGGCCTGCTCAAACCGCCGGGCAGCCTGGGCAGACTGGAAACCTTAGCCGTTCAGCTCGCGGGTATGCCGGGTCTTAACG GTACGCCGCAGGTAGGTGAAAAGGCGGTGCTGGTGATGTGCGCCGACCATGGCGTCTGGGATGAAGGCGTAGCGGTTTCG CCCAAAATCGTGACGGCGATTCAGGCGGCGAATATGACGCGGGGAACAACCGGCGTATGCGTGCTTGCCGCTCAGGCCGG TGCGAAGGTGCATGTCATTGATGTCGGTATTGATGCCGAACCTATTCCTGGCGTAGTTAATATGCGCGTCGCGCGCGGCT GCGGAAATATTGCCGTTGGCCCGGCGATGAGTCGCTTGCAGGCTGAGGCGCTTTTGCTGGAGGTTTCCCGCTACACCTGC GACCTGGCGCAACGCGGCGTGACCTTATTTGGCGTAGGGGAGCTGGGAATGGCGAACACTACGCCAGCCGCCGCGATGGT CAGCGTTTTTACAGGAAGTGATGCAAAAGAGGTGGTGGGGATTGGCGCGAATCTTCCGCCTTCCCGCATCGATAATAAAG TGGACGTCGTGCGGCGGGCGATTGCGATTAATCAGCCCAATCCGCGCGACGGCATTGATGTGTTGTCGAAGGTGGGTGGT TTTGATCTGGTCGGGATGACCGGCGTGATGCTTGGCGCGGCAAGGTGTGGCTTACCCGTATTGCTGGATGGCTTTCTTTC CTACTCGGCAGCGCTGGCGGCCTGTCAGATTGCGCCTGCGGTGAGACCTTATCTGATCCCGTCGCACTTTTCGGCGGAAA AGGGCGCCCGCATCGCGCTCGCGCATTTGTCTATGGAACCCTATTTGCATATGGCGATGCGGTTAGGTGAAGGAAGCGGC GCGGCGCTGGCGATGCCGATCGTGGAAGCCGCGTGCGCCATGTTCCACAACATGGGGGAGTTGGCGGCCAGTAATATTGT CCTGCCGGAGGGGAACGCAAACGCAACATAA Protein sequence : MQTLHALLRDIPAPDAEAMARAQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVS PKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYTC DLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGG FDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSG AALAMPIVEAACAMFHNMGELAASNIVLPEGNANAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 2e-135 | 79 |
