Gene Information

Name : SNSL254_A2222 (SNSL254_A2222)
Accession : YP_002041312.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduJ
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2131725 - 2132000 bp
Length : 276 bp
Strand : +
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAATAACGCACTGGGACTGGTTGAAACAAAAGGGCTGGTCGGCGCCATTGAAGCCGCCGATGCAATGGTTAAATCCGC
CAACGTACAGCTGGTGGGCTACGAAAAAATTGGTTCTGGCCTGGTTACCGTCATGGTTCGCGGCGATGTCGGCGCGGTTA
AAGCAGCCGTAGATGCCGGCAGCGCGGCGGCAAGCGTCGTGGGTGAAGTGAAATCCTGCCACGTTATCCCGCGTCCGCAC
AGTGATGTTGAGGCCATTTTACCGAAATCAGCCTAA

Protein sequence : 
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 67
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A2222 YP_002041312.1 propanediol utilization protein PduJ VFG1596 Protein 2e-13 68
SNSL254_A2222 YP_002041312.1 propanediol utilization protein PduJ VFG1598 Protein 6e-13 67
SNSL254_A2222 YP_002041312.1 propanediol utilization protein PduJ VFG1597 Protein 9e-13 65