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Name : SNSL254_A0321 (SNSL254_A0321) Accession : YP_002039528.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : Rhs family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 335799 - 339878 bp Length : 4080 bp Strand : + Note : identified by match to protein family HMM PF03527; match to protein family HMM PF05488; match to protein family HMM PF05593; match to protein family HMM TIGR01643 DNA sequence : ATGTATGAAGCAGCCCGTGTGGATGACCCAATCTACCACACCAGTGCGCTCGCCGGGTTTCTTATCGGCGCTATCATCGG CATCGCCATTATCGCGCTTGCCGCCTTTGCCTTCTTTAGCTGCGGTTTTCTTGCCGGGCTGATTCTGGGTTTTATGGCCG ATCAAATAGCCTCCGGGGTATTGCAACTGGGCGAGGCCATCGGGCGCTCCAACCACCACACGGCAGGAAAAATCCTCACC GGTTCGGAGAATGTCAGCACCAACAGTCGCCCGGCGGCGCGCGCGGTACTGAGTACGGTGAAATGCGATAACCATATCGC AGAAAAACGCATCGCCCAGGGGTCGGAAAATATCTACATTAACAGCCAGCCTGCCGCCCGTAAGGATGACCACACCGAAT GCGACGCGGTGATTGAAGACGGTTCGCCGAATGTGTTTCTCGGCGGCGGCACACAGACGGTACTGGAAATCAGTTCTGAA ATTCCGGACTGGCTGCGCAAGGTGGTGGATGTATTGTTTGTCGTGGCGAGTCTGCTCGGCGGGCTGGCCGGGGCGTGGCG GCAGGCGGCAAAGCTGGGGACGAAATTTGGCACTAAATGTGCCGCTAAGTTTATCGGCGGGGAGCTTGTCGGGATGGCCG TGGGTGAGGCTATCAGCGGGCTGTTCAGCAATCCGGTGGATGTGACCACCGGGCAGAAAATCCTGCTGCCGGAAACGGAC TTCACTCTGCCCGGTCGCCTGCCGGTCACCTGCTCGCGTTTTTACGCCAGCCACCTGGAAACTGTGGGACTGTTGGGACG GGGCTGGCGGCTGAACTGGGAAACCAGCCTGCGCGAGGACGATGAACACATCACGCTGACCGGCGTACAGGGGCGGGAAC TGCGTTACCCGAAAACGATGCTGACGCCCGGCCACCAGATATTTGACCCGGAAGAACAGTTATACCTCAGCCGCCTGCAT GACGGGCGTTACGTGCTGCATTACACCGATCGCAGCTATTACGTATTTGGTGATTTTGACAGTGACGGCATGGCATACCT GCTGTTTATGGAGACGCCGCACCGCCAGCGCATTGTCTTCGGGCACGAAGGAGGCAGACTGGTACGGATAGCCTCCAGCA GCGGGCATCACCTGTTACTGCACCGCACACAGACCCCGGCAGGGGAGCGGCTGTCGCGAATTGAACTGGTGCAGGGCGGC ACCCGTGGCAATCTGGTGGAGTACCGGTATGACGATAACGGTCAACTGACCGGCGTGGTGAACCGGGCGGGAACGCAGGT GCGGCAGTTTGCTTATGAAAACGGGCTGATGACGGCGCACAGCAATGCGGCGGGGTTCACCTGCCGCTACCGCTGGCAGG AACTCGACGGCGCGCCGCGCGTGACGGAGCACGACACCAGTGACGGTGAACATTACCGCTTTGACTATGATTTTGCCGCA GGCACCACCACCGTCACCGGCAGGCAGGGGGAGTCATGGCAGTGGTGGTACGACAGGGAGACGTATATCACCGCGCACCG GACGCCGGGCGGTGGAATGTACCGCTTCACGTACAACGAAGACCACTTCCCTGTCAACATTGAGCTGCCCGGCGGTCGCA CGGTGGCGTATGAATATGACATCCAGAACCGGGTGGTGAAGACGACAGATCCGGAAGGCCGGGTGACGCAGACGCAGTGG AACGGCGAGTTCGACGAAATCACGCGCACGGCGCTGGACGATGACGCTGTCTGGAAAACGCAGTACAACGCCCACGGCCA GCCAGTGCAGGAGACGGACCCGGAAGGGCGGGTGACGCAGTACGCTTACGATGAACAGGGGCAGATGTGCAGCCGGACGG ATGCGGCGGGCGGCACGGTGGTGACGGCGTTCGACAGCCGGGGGCAGATGACGCGGTACACCGACTGTTCAGGGCGCAGC ACAGGATATGACCACGATGAGGACGGCAACCTGACGCGGGTGACGGACGCGGAAGGGAAGGTGGTACGCATCAGCTACAA CCGACTTGGGTTGCCGGAGACGGTGAACTCACCGGGGAAACAGCAGGACAGGTATACCTGGAATGCGCTGGGGCTGATGA GCAGCCACCGGCGCATCACGGGGAGCGTGGAGAGCTGGCGGTATACGCCGCGCGGTCTGCTGGCGGCGCACACGGATGAG GAGAAGCGCGAGACGCGCTGGCAGTACACGCCGGAAGGCCGGGTGGCAGCGCTGACCAACGGCAACGGGGCGCAGTACCG GTTCAGTCACGATGCGGACGGCAGGCTGGTGCGTGAGGTGCGCCCGGACGGACTGAGCCGTACTTTTATCCTGGACGACA GCGGTTATCTGACGGCGATACAGACCACGGGCACGCAGGGCGGCGTGCGGCGGGAGACGCAGCAGCGGGATGCGCTGGGC CGTCTGTTACGGACGGAGAATGAACACTGCCAGCGGACGTTCAGCTACAACCGGCTGGACCAGATAACGGCAGTGACGCT CACGCCCACGGAGGCGGGGCAACAGCAGCACCGGATGCAGGCCGACACGGTGCGTTTTGAGTATGACCGCAGCGGCTGGC TGACGGCGGAGCACGCGGGGAACGGCAGCATACGTTATCAGCGCGACGCGCTGGGCAACCCGACGGACATCACGCTGCCG GACGGGCAGCACCTGACGCATCTGTATTACGGGAGCGGGCATCTGTTACAGACGGCGCTGGACGGCCTGACGGTGAGCGA GTATGAGCGCGACAGCCTGCACCGTCAGATAATGCGCACGCAGGGGCAGCTTGCGACGTACAGCGGCTATGACGACGACG GGCTGCTGAGCTGGCAGCGCAGCCTGGCGCCCGGCAGTGCCCCTGTTCTTCCCGGCCAGCGCCCGGCGCGGCAGGGCTGC GTGACGTCGAGGGACTATTACTGGAACAACCACGGCGAGGTGGGCACGATTGACGACGGCCTGCGTGGCAGCGTGGTGTA CAGCTATGACAGAAGCGGTTACCTGACCGGGCGCTCAGGTCAGATGTATGACCATGACCGTTATTATTACGATAAGGCGG GCAACCTGCTGGATAACGAAGGGCAGGGTCCGGTGATGAACAACCGGCTGCCGGGCTGTGGTCGTGACCGTTACGGTTAT AACGAGTGGGGCGAGCTGACCACGCGGCGCGACCAGCAACTGGAGTGGAACGCGCAGGGGCAGCTGACGCGGGTCATCAG CGGCAACACGGAGACGCACTACGGCTACGATGCGCTGGGGAGGCGAATCCGCAAGGCGACGTACGGGCGGCACACGGGTC ATACGGCGCGGAGCCGGACGGACTTTGTGTGGGAGGGGTTCAGGCTGTTGCAGGAGAACGTGCAGCAGCAGGGCTGGCGG ACCTATCTGTACGATGCGGAACAGCCGTACACGCCGGTGGCGAGCGTGACGGGAAAGGGAGAAAGCAGGCAGGTGTGGTA TTACCACACGGATGTGACGGGCACGCCGCAGGAGGTGACGGCGGCAGATGGAACGCTGGTGTGGGCGGGGTATATCAGGG GGTTTGGAGAGAATGCGGCGGACATCAGCAACAGCGGGGCGTACTTTCACCAGCCGCTGCGGCTGCCGGGGCAGTATTTT GACGACGAGACAGGGCTGCATTACAATCTGTTCAGATATTATGCACCGGAGTGTGGCAGGTTCGTCAGTCAGGACCCGAT AGGGTTAAGGGGCGGGTTAAACCTCTATGCTTATGCGCCTAATCCGATTAGATGGATCGATCCTTTAGGACTTGCTATCC TGGAGCATCAATCTAATTTTGATGCGGCAAGGAGAACCGGATTTGAAAATGCGGGTATGACAAACCCTGAGGATGTCACT TTCTCGAAAGTCGATCCCAAAACTGGTACTGTTGTTGAGTTTAAAGGTCCAAATGGGGCTAAAGTTGCTTATGATGCACC TCATGCAGATATGGATGTGACAGCAGGGCATGATAAACCACATGTTGGTTGGCAATCCGCAGGAAAAAGAGGTTCCGGAG GAGCTAATAGAGGTAATATTACTTATGATGGCCCACAACATCCGCATCGCTCTGACTCTAAGGGAGATGATAAATGTTAA Protein sequence : MYEAARVDDPIYHTSALAGFLIGAIIGIAIIALAAFAFFSCGFLAGLILGFMADQIASGVLQLGEAIGRSNHHTAGKILT GSENVSTNSRPAARAVLSTVKCDNHIAEKRIAQGSENIYINSQPAARKDDHTECDAVIEDGSPNVFLGGGTQTVLEISSE IPDWLRKVVDVLFVVASLLGGLAGAWRQAAKLGTKFGTKCAAKFIGGELVGMAVGEAISGLFSNPVDVTTGQKILLPETD FTLPGRLPVTCSRFYASHLETVGLLGRGWRLNWETSLREDDEHITLTGVQGRELRYPKTMLTPGHQIFDPEEQLYLSRLH DGRYVLHYTDRSYYVFGDFDSDGMAYLLFMETPHRQRIVFGHEGGRLVRIASSSGHHLLLHRTQTPAGERLSRIELVQGG TRGNLVEYRYDDNGQLTGVVNRAGTQVRQFAYENGLMTAHSNAAGFTCRYRWQELDGAPRVTEHDTSDGEHYRFDYDFAA GTTTVTGRQGESWQWWYDRETYITAHRTPGGGMYRFTYNEDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQW NGEFDEITRTALDDDAVWKTQYNAHGQPVQETDPEGRVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDCSGRS TGYDHDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSVESWRYTPRGLLAAHTDE EKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVRPDGLSRTFILDDSGYLTAIQTTGTQGGVRRETQQRDALG RLLRTENEHCQRTFSYNRLDQITAVTLTPTEAGQQQHRMQADTVRFEYDRSGWLTAEHAGNGSIRYQRDALGNPTDITLP DGQHLTHLYYGSGHLLQTALDGLTVSEYERDSLHRQIMRTQGQLATYSGYDDDGLLSWQRSLAPGSAPVLPGQRPARQGC VTSRDYYWNNHGEVGTIDDGLRGSVVYSYDRSGYLTGRSGQMYDHDRYYYDKAGNLLDNEGQGPVMNNRLPGCGRDRYGY NEWGELTTRRDQQLEWNAQGQLTRVISGNTETHYGYDALGRRIRKATYGRHTGHTARSRTDFVWEGFRLLQENVQQQGWR TYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAYFHQPLRLPGQYF DDETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGMTNPEDVT FSKVDPKTGTVVEFKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDSKGDDKC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0321 | NP_454898.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 99 |
